C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10154
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000084445 Gm10154-001 ENSMUSG00000066116 10090 - 4:83505185-83505538 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaENSMUST00000084445
Transcript ID Brain Liver Muscle Ovary Placenta
ENSMUST00000084445 0.170±0.09 0.073±0.00 0.208±0.00 0.275±0.00 0.290±0.23

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00051U CIL_00051U_0003 CGP 4:83455680-83864670
CIL_0007VI CIL_0007VI_0002 VISTA 4:83494853-84095171

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000394665 RPL34-002 protein_coding Homo_sapiens 0 486
ENST00000394667 RPL34-001 protein_coding Homo_sapiens 0 486
ENST00000394668 RPL34-003 protein_coding Homo_sapiens 0 486
ENST00000407959 RP1-182O16.1-001 processed_pseudogene Homo_sapiens 0 387
ENST00000428810 RPL34P27-001 processed_pseudogene Homo_sapiens 0 392
ENST00000434718 RP11-569G9.7-001 processed_pseudogene Homo_sapiens 0 327
ENST00000445636 RPL34P26-001 processed_pseudogene Homo_sapiens 0 372
ENST00000450455 RPL34P1-001 processed_pseudogene Homo_sapiens 0 398
ENST00000456162 RP11-58A11.2-001 processed_pseudogene Homo_sapiens 0 272
ENST00000465389 RPL34P34-001 processed_pseudogene Homo_sapiens 0 398
ENST00000466686 RP1-181J22.1-001 processed_pseudogene Homo_sapiens 0 291
ENST00000473394 RP11-268I9.1-001 processed_pseudogene Homo_sapiens 0 228
ENST00000473936 CTB-2L9.1-001 processed_pseudogene Homo_sapiens 0 285
ENST00000475295 RPL34P31-001 processed_pseudogene Homo_sapiens 0 340
ENST00000486062 RPL34P33-001 processed_pseudogene Homo_sapiens 0 355
ENST00000498395 RP11-841C19.1-001 processed_pseudogene Homo_sapiens 0 339
ENST00000502534 RPL34-006 protein_coding Homo_sapiens 0 486
ENST00000504231 RPL34-007 retained_intron Homo_sapiens 0 193
ENST00000506397 RPL34-005 protein_coding Homo_sapiens 0 486

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