Transcript ID | Liver | Muscle |
---|---|---|
ENSMUST00000105897 | 1.354±0.00 | 0.795±0.00 |
Transcript Info |
||||||
Description: | AT rich interactive domain 1A (SWI-like) | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000105897 | Arid1a-201 | ENSMUSG00000007880 | 10090 | - | 4:133679008-133753611 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0007T4 | CIL_0007T4_0002 | VISTA | 4:133429051-134030305 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000122 | IDA | negative regulation of transcription from RNA polymerase II promoter |
GO:0000790 | IDA | nuclear chromatin |
GO:0001843 | IMP | neural tube closure |
GO:0003205 | IMP | cardiac chamber development |
GO:0003408 | IMP | optic cup formation involved in camera-type eye development |
GO:0003677 | IEA | DNA binding |
GO:0005515 | IPI | protein binding |
GO:0005634 | IEA | nucleus |
GO:0006325 | IPI | chromatin organization |
GO:0006337 | IEA | nucleosome disassembly |
GO:0006351 | IEA | transcription, DNA-templated |
GO:0016514 | IDA:ISS | SWI/SNF complex |
GO:0016922 | IEA | ligand-dependent nuclear receptor binding |
GO:0030520 | ISS | intracellular estrogen receptor signaling pathway |
GO:0030521 | ISS | androgen receptor signaling pathway |
GO:0030900 | IMP | forebrain development |
GO:0031491 | IDA | nucleosome binding |
GO:0042921 | IEA | glucocorticoid receptor signaling pathway |
GO:0043044 | IDA | ATP-dependent chromatin remodeling |
GO:0045893 | ISS | positive regulation of transcription, DNA-templated |
GO:0060674 | IMP | placenta blood vessel development |
GO:0071564 | IDA | npBAF complex |
GO:0071565 | IDA | nBAF complex |
GO:0090544 | IDA | BAF-type complex |
GO:1901998 | IMP | toxin transport |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSDART00000140747 | arid1ab-001 | protein_coding | Danio_rerio | 0 | 392 |
ENSDART00000135930 | arid1aa-001 | protein_coding | Danio_rerio | 4.2039e-45 | 189 |
ENSDART00000084263 | arid1aa-201 | protein_coding | Danio_rerio | 9.80909e-45 | 187 |
ENST00000324856 | ARID1A-001 | protein_coding | Homo_sapiens | 0 | 11880 |
ENST00000346085 | ARID1B-001 | protein_coding | Homo_sapiens | 2e-28 | 134 |
ENST00000374152 | ARID1A-003 | protein_coding | Homo_sapiens | 0 | 8137 |
ENST00000414678 | ARID1B-005 | protein_coding | Homo_sapiens | 2e-28 | 134 |
ENST00000430291 | ARID1A-005 | retained_intron | Homo_sapiens | 0 | 512 |
ENST00000430799 | ARID1A-009 | protein_coding | Homo_sapiens | 0 | 5411 |
ENST00000457599 | ARID1A-002 | protein_coding | Homo_sapiens | 0 | 6202 |
ENST00000466382 | ARID1A-004 | nonsense_mediated_decay | Homo_sapiens | 0 | 3022 |
ENST00000524572 | ARID1A-007 | protein_coding | Homo_sapiens | 0 | 521 |
ENST00000532781 | ARID1A-006 | nonsense_mediated_decay | Homo_sapiens | 0 | 2604 |
ENST00000615191 | ARID1A-201 | protein_coding | Homo_sapiens | 0 | 5131 |