C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy polypeptide 8, skeletal muscle, perinatal
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000108685 Myh8-003 ENSMUSG00000055775 10090 + 11:67277418-67282148 protein_coding

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000108685
Transcript ID Testis
ENSMUST00000108685 0.017±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 IEA motor activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0008152 IEA metabolic process
GO:0016459 IDA myosin complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000051360 MYH13 (3 of 10)-201 protein_coding Danio_rerio 0 289
ENSDART00000123920 MYH13 (5 of 10)-202 protein_coding Danio_rerio 0 279
ENSDART00000130036 MYH13 (5 of 10)-201 protein_coding Danio_rerio 0 279
ENSDART00000075210 protein_coding Danio_rerio 0 274
ENSDART00000026257 myhb-201 protein_coding Danio_rerio 0 261
ENSDART00000156295 myhb-001 protein_coding Danio_rerio 0 261
ENSDART00000099532 vmhc-001 protein_coding Danio_rerio 0 254
ENSDART00000135233 si:ch211-24n20.3-201 protein_coding Danio_rerio 0 252
ENSDART00000150162 si:ch211-24n20.3-001 protein_coding Danio_rerio 0 252
ENSDART00000124862 smyhc2-003 protein_coding Danio_rerio 0 252
ENSDART00000056849 smyhc2-001 protein_coding Danio_rerio 0 252
ENSDART00000137082 CU633479.6-201 protein_coding Danio_rerio 0 252
ENSDART00000137989 CU633479.5-201 protein_coding Danio_rerio 0 252
ENSDART00000133338 CR450736.2-201 protein_coding Danio_rerio 0 246
ENSDART00000066527 smyhc3-201 protein_coding Danio_rerio 0 246
ENSDART00000150060 smyhc3-001 protein_coding Danio_rerio 0 246
ENSDART00000078958 vmhcl-201 protein_coding Danio_rerio 0 235
ENSDART00000128784 vmhcl-001 protein_coding Danio_rerio 0 235
ENSDART00000123565 vmhcl-004 protein_coding Danio_rerio 0 235
ENSDART00000141922 vmhcl-002 protein_coding Danio_rerio 0 235
ENSDART00000045928 smyhc1-202 protein_coding Danio_rerio 0 219
ENSDART00000004536 smyhc1-201 protein_coding Danio_rerio 0 219
ENSDART00000056853 smyhc1-203 protein_coding Danio_rerio 0 219
ENSDART00000147211 smyhc2-002 retained_intron Danio_rerio 2e-37 161
ENST00000226207 MYH1-001 protein_coding Homo_sapiens 0 523
ENST00000245503 MYH2-001 protein_coding Homo_sapiens 0 556
ENST00000252172 MYH13-001 protein_coding Homo_sapiens 0 420
ENST00000255381 MYH4-001 protein_coding Homo_sapiens 0 573
ENST00000262873 MYH7B-001 protein_coding Homo_sapiens 5e-28 132
ENST00000356287 MYH6-001 protein_coding Homo_sapiens 0 294
ENST00000397183 MYH2-201 protein_coding Homo_sapiens 0 556
ENST00000403437 MYH8-001 protein_coding Homo_sapiens 0 701
ENST00000405093 MYH6-201 protein_coding Homo_sapiens 0 294
ENST00000418404 MYH13-003 protein_coding Homo_sapiens 0 420
ENST00000420805 MYH2-002 protein_coding Homo_sapiens 0 556
ENST00000439784 MYH16-001 unitary_pseudogene Homo_sapiens 0.000000000000003 90
ENST00000453194 MYH16-002 processed_transcript Homo_sapiens 5e-16 90
ENST00000470929 MYH7B-002 retained_intron Homo_sapiens 1e-28 132
ENST00000532183 MYH2-006 protein_coding Homo_sapiens 0 556
ENST00000557461 MYH6-002 retained_intron Homo_sapiens 0 294
ENST00000578017 MYH2-009 protein_coding Homo_sapiens 0 420
ENST00000579489 MYH3-004 retained_intron Homo_sapiens 0 259
ENST00000583535 MYH3-001 protein_coding Homo_sapiens 0 357
ENST00000618182 MYH7B-201 protein_coding Homo_sapiens 5e-28 132
ENST00000621918 MYH13-201 protein_coding Homo_sapiens 0 420
ENST00000622564 MYH2-202 protein_coding Homo_sapiens 0 556

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