| Transcript ID | Muscle |
|---|---|
| ENSMUST00000110356 | 14.028±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | serine/arginine-rich splicing factor 5 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000110356  |
Srsf5-004 |
ENSMUSG00000021134 |
10090 | + |
12:80945585-80950503  |
protein_coding |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002M1 | CIL_0002M1_0002 | CGP | 12:80790532-80950507 |
| CIL_0000U3 | CIL_0000U3_0002 | CGP | 12:80945504-80968079 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0005515 | IPI | protein binding |
| GO:0005634 | IEA | nucleus |
| GO:0005730 | IEA | nucleolus |
| GO:0005737 | IEA | cytoplasm |
| GO:0006351 | IEA | transcription, DNA-templated |
| GO:0006355 | IEA | regulation of transcription, DNA-templated |
| GO:0006397 | IEA | mRNA processing |
| GO:0008380 | IEA | RNA splicing |
| GO:0009611 | IDA | response to wounding |
| GO:0016607 | IDA | nuclear speck |
| GO:0044822 | IEA | poly(A) RNA binding |
| GO:0050733 | IPI | RS domain binding |
| GO:0051726 | IEA | regulation of cell cycle |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000394366
|
SRSF5-005 | protein_coding | Homo_sapiens | 0 | 1977 |
|
ENST00000553369
|
SRSF5-018 | protein_coding | Homo_sapiens | 0 | 538 |
|
ENST00000553521
|
SRSF5-003 | protein_coding | Homo_sapiens | 0 | 1786 |
|
ENST00000553548
|
SRSF5-016 | protein_coding | Homo_sapiens | 0 | 414 |
|
ENST00000553635
|
SRSF5-004 | protein_coding | Homo_sapiens | 0 | 1694 |
|
ENST00000554021
|
SRSF5-010 | protein_coding | Homo_sapiens | 0 | 538 |
|
ENST00000554465
|
SRSF5-001 | retained_intron | Homo_sapiens | 0 | 1253 |
|
ENST00000554929
|
SRSF5-008 | retained_intron | Homo_sapiens | 0 | 1062 |
|
ENST00000555349
|
SRSF5-011 | protein_coding | Homo_sapiens | 0 | 540 |
|
ENST00000555547
|
SRSF5-007 | nonsense_mediated_decay | Homo_sapiens | 0 | 904 |
|
ENST00000556184
|
SRSF5-006 | retained_intron | Homo_sapiens | 0 | 881 |
|
ENST00000556330
|
SRSF5-014 | retained_intron | Homo_sapiens | 0 | 383 |
|
ENST00000556436
|
SRSF5-017 | retained_intron | Homo_sapiens | 0 | 438 |
|
ENST00000556587
|
SRSF5-019 | processed_transcript | Homo_sapiens | 0 | 1387 |
|
ENST00000556647
|
SRSF5-013 | processed_transcript | Homo_sapiens | 0 | 760 |
|
ENST00000557154
|
SRSF5-002 | protein_coding | Homo_sapiens | 0 | 1781 |
|
ENST00000557460
|
SRSF5-015 | retained_intron | Homo_sapiens | 0 | 427 |
