C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15957
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118893 Gm15957-001 ENSMUSG00000082784 10090 - 18:77218354-77219327 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastMusclePlacentaENSMUST00000118893
Transcript ID Brain Breast Muscle Placenta
ENSMUST00000118893 0.037±0.02 0.041±0.00 0.069±0.00 0.029±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001P7 CIL_0001P7_0002 CGP 18:77185853-77442341

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 521
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 499
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 518
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 521
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 521
ENST00000398586 GAPDHP15-001 processed_pseudogene Homo_sapiens 2e-29 134
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 388
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 398
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 303
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 466
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 381
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 322
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 405
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 411
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 213
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 313
ENST00000450472 GAPDHP14-001 processed_pseudogene Homo_sapiens 7e-39 165
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 372
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 499
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 499
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 379
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 342
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 366
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 383
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 361
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 8e-39 165
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 507

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