C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 8302
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119217 Gm8302-001 ENSMUSG00000081773 10090 - 18:38771496-38772347 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000119217
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000119217 0.127±0.00 0.209±0.05 0.016±0.01 0.054±0.02 0.181±0.10 0.141±0.05 0.134±0.02 0.054±0.02 0.029±0.02 0.057±0.01 0.048±0.01 0.063±0.00 0.050±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007W6 CIL_0007W6_0002 VISTA 18:38503792-39105763

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 486
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 486
ENST00000433054 RP11-1O7.1-001 processed_pseudogene Homo_sapiens 0 531
ENST00000445918 RP11-388B24.4-001 processed_pseudogene Homo_sapiens 0 466
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 348
ENST00000457299 AC087163.2-001 processed_pseudogene Homo_sapiens 0 488
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 625
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 532
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 457
ENST00000492327 RPS2P39-001 processed_pseudogene Homo_sapiens 0 243
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 562

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