C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494359 RP11-452G18.2-001 ENSG00000197149 9606 + 11:17228279-17229151 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000494359
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000494359 0.351±0.00 1.704±0.00 0.421±0.00 0.033±0.00 0.158±0.00 0.186±0.02 0.140±0.05 0.244±0.00 0.103±0.00 0.200±0.00 1.583±0.00 0.303±0.19 0.089±0.01 0.622±0.27

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZV CIL_0003ZV_0001 CGP 11:17077730-17349974

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000110842 rps2-201 protein_coding Danio_rerio 0 656
ENSDART00000138107 rps2-001 protein_coding Danio_rerio 0 656
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000119578 Gm11643-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000120476 Gm13559-001 processed_pseudogene Mus_musculus 0 601
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000117930 Gm13094-001 processed_pseudogene Mus_musculus 0 453
ENSMUST00000116032 Gm16073-001 processed_pseudogene Mus_musculus 0 414
ENSMUST00000119349 Gm11524-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000116022 Gm15846-001 processed_pseudogene Mus_musculus 0 313
ENSMUST00000122458 Gm12780-001 processed_pseudogene Mus_musculus 0 224
ENSDART00000141100 rps2-002 protein_coding Danio_rerio 0 189
ENSMUST00000117457 Gm11540-001 unprocessed_pseudogene Mus_musculus 2e-29 134
ENSDART00000133878 rps2-003 retained_intron Danio_rerio 5e-25 119

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