C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30, pseudogene 11
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119630 Rpl30-ps11-001 ENSMUSG00000081461 10090 - X:12456886-12457230 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeLiverOvaryPlacentaENSMUST00000119630
Transcript ID Adipose Liver Ovary Placenta
ENSMUST00000119630 0.201±0.00 0.343±0.00 0.211±0.00 0.195±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005QF CIL_0005QF_0002 CGP X:12036740-12617049

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287038 RPL30-001 protein_coding Homo_sapiens 0 466
ENST00000396070 RPL30-009 protein_coding Homo_sapiens 0 226
ENST00000414021 RPL30P2-001 processed_pseudogene Homo_sapiens 0 248
ENST00000419341 RPL30P16-001 processed_pseudogene Homo_sapiens 0 206
ENST00000429309 RPL30P4-001 processed_pseudogene Homo_sapiens 0 392
ENST00000457129 RPL30P15-001 processed_pseudogene Homo_sapiens 0 283
ENST00000482744 RPL30P14-001 processed_pseudogene Homo_sapiens 0 405
ENST00000517489 RPL30-004 retained_intron Homo_sapiens 0 387
ENST00000518164 RPL30-002 processed_transcript Homo_sapiens 0 226
ENST00000518850 RPL30-010 nonsense_mediated_decay Homo_sapiens 0 231
ENST00000520998 RPL30-006 retained_intron Homo_sapiens 0 231
ENST00000521112 RPL30-005 retained_intron Homo_sapiens 0 200
ENST00000521291 RPL30-007 protein_coding Homo_sapiens 0 466
ENST00000521726 RPL30-003 protein_coding Homo_sapiens 0 466

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