C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30 pseudogene 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000419341 RPL30P16-001 ENSG00000230169 9606 + 8:112538889-112539317 processed_pseudogene

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005RS CIL_0005RS_0001 CGP 8:109963645-113437099
CIL_0005RP CIL_0005RP_0001 CGP 8:112222928-115809673

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000122265 Rpl30-ps9-001 processed_pseudogene Mus_musculus 0 233
ENSMUST00000142643 Rpl30-005 processed_transcript Mus_musculus 0 233
ENSMUST00000009039 Rpl30-002 protein_coding Mus_musculus 0 233
ENSMUST00000079735 Rpl30-001 protein_coding Mus_musculus 0 233
ENSMUST00000118307 Gm12191-001 processed_pseudogene Mus_musculus 0 228
ENSMUST00000076166 Rpl30-ps8-201 processed_pseudogene Mus_musculus 0 228
ENSMUST00000117119 Rpl30-ps10-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000119767 Rpl30-ps1-001 processed_pseudogene Mus_musculus 0 222
ENSMUST00000118664 Gm7429-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000071536 Gm6570-201 processed_pseudogene Mus_musculus 0 217
ENSMUST00000096279 Gm10343-201 processed_pseudogene Mus_musculus 0 211
ENSMUST00000119630 Rpl30-ps11-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000140527 Rpl30-004 processed_transcript Mus_musculus 0.00000004 62
ENSMUST00000135417 Rpl30-003 retained_intron Mus_musculus 0.00000004 62

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