C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L30 pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000414021 RPL30P2-001 ENSG00000234272 9606 + 2:152131555-152131845 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyTestisENST00000414021
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Testis
ENST00000414021 0.088±0.00 0.228±0.00 0.090±0.00 0.166±0.00 0.832±0.67 0.953±0.64 0.055±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007E3 CIL_0007E3_0001 CGP 2:151832776-152175992
CIL_0007E6 CIL_0007E6_0001 CGP 2:152116801-152649834

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000009039 Rpl30-002 protein_coding Mus_musculus 0 276
ENSMUST00000079735 Rpl30-001 protein_coding Mus_musculus 0 276
ENSMUST00000142643 Rpl30-005 processed_transcript Mus_musculus 0 272
ENSMUST00000118307 Gm12191-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000117119 Rpl30-ps10-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000122265 Rpl30-ps9-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000096279 Gm10343-201 processed_pseudogene Mus_musculus 0 270
ENSMUST00000076166 Rpl30-ps8-201 processed_pseudogene Mus_musculus 0 265
ENSMUST00000071536 Gm6570-201 processed_pseudogene Mus_musculus 0 265
ENSMUST00000118664 Gm7429-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000117928 Rpl30-ps3-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000119630 Rpl30-ps11-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000119573 Gm9703-001 processed_pseudogene Mus_musculus 0 244
ENSMUST00000122391 Gm14530-001 processed_pseudogene Mus_musculus 0 191

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