Transcript ID | Adipose | Brain | Colon | Heart | Liver | Lung | Placenta |
---|---|---|---|---|---|---|---|
ENST00000374038 | 43.367±0.00 | 28.263±0.00 | 34.417±0.00 | 16.888±0.00 | 13.002±0.00 | 48.162±0.00 | 20.704±0.00 |
Transcript Info |
||||||
Description: | RNA binding motif protein 39 | |||||
---|---|---|---|---|---|---|
Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000374038 | RBM39-020 | ENSG00000131051 | 9606 | - | 20:35721867-35742258 | protein_coding |
Expression Patterns
|
Conserved Regions | |||
---|---|---|---|
Region ID | Sub-Region | Region Type | Position |
CIL_0000WY | CIL_0000WY_0001 | CGP | 20:35699272-35742312 |
CIL_0000X2 | CIL_0000X2_0001 | CGP | 20:35703609-35950381 |
Gene Ontology | ||
---|---|---|
GO ID | Evidence Type | GO Description |
GO:0000166 | IEA | nucleotide binding |
GO:0003676 | IEA | nucleic acid binding |
GO:0003723 | IEA | RNA binding |
GO:0005634 | IEA | nucleus |
GO:0006397 | IEA | mRNA processing |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000109587 | Rbm39-001 | protein_coding | Mus_musculus | 0 | 1242 |
ENSMUST00000029149 | Rbm39-018 | protein_coding | Mus_musculus | 0 | 1221 |
ENSMUST00000126992 | Rbm39-020 | protein_coding | Mus_musculus | 0 | 1205 |
ENSMUST00000142071 | Rbm39-026 | nonsense_mediated_decay | Mus_musculus | 0 | 1203 |
ENSMUST00000146297 | Rbm39-003 | protein_coding | Mus_musculus | 0 | 981 |
ENSMUST00000155837 | Rbm39-002 | nonsense_mediated_decay | Mus_musculus | 0 | 887 |
ENSMUST00000153514 | Rbm39-025 | nonsense_mediated_decay | Mus_musculus | 0 | 800 |
ENSMUST00000146288 | Rbm39-021 | protein_coding | Mus_musculus | 0 | 651 |
ENSMUST00000138381 | Rbm39-015 | retained_intron | Mus_musculus | 0 | 492 |
ENSMUST00000109584 | Rbm39-022 | protein_coding | Mus_musculus | 0 | 442 |
ENSMUST00000131625 | Rbm39-016 | processed_transcript | Mus_musculus | 0 | 436 |
ENSMUST00000147098 | Rbm39-013 | nonsense_mediated_decay | Mus_musculus | 0 | 399 |
ENSMUST00000135274 | Rbm39-017 | retained_intron | Mus_musculus | 0 | 399 |
ENSMUST00000148794 | Rbm39-019 | protein_coding | Mus_musculus | 0 | 398 |
ENSMUST00000182280 | Gm8816-001 | processed_pseudogene | Mus_musculus | 0 | 377 |
ENSMUST00000128243 | Rbm39-012 | retained_intron | Mus_musculus | 0 | 368 |
ENSMUST00000132929 | Rbm39-007 | retained_intron | Mus_musculus | 0 | 361 |
ENSMUST00000161037 | Gm8837-001 | processed_pseudogene | Mus_musculus | 0 | 351 |
ENSMUST00000146549 | Rbm39-008 | nonsense_mediated_decay | Mus_musculus | 0 | 340 |
ENSMUST00000130516 | Rbm39-006 | retained_intron | Mus_musculus | 0 | 337 |
ENSMUST00000137566 | Rbm39-009 | nonsense_mediated_decay | Mus_musculus | 0 | 335 |
ENSMUST00000152919 | Rbm39-005 | nonsense_mediated_decay | Mus_musculus | 0 | 322 |
ENSMUST00000137340 | Rbm39-004 | retained_intron | Mus_musculus | 0 | 315 |
ENSMUST00000140001 | Rbm39-010 | processed_transcript | Mus_musculus | 0 | 305 |
ENSMUST00000150272 | Rbm39-011 | processed_transcript | Mus_musculus | 7.9874e-44 | 182 |
ENSMUST00000154677 | Rbm39-024 | nonsense_mediated_decay | Mus_musculus | 2e-24 | 117 |
ENSMUST00000120746 | Ncald-002 | protein_coding | Mus_musculus | 0.0002 | 53 |
ENSMUST00000119730 | Ncald-003 | protein_coding | Mus_musculus | 0.0002 | 53 |
ENSMUST00000132423 | Ncald-011 | processed_transcript | Mus_musculus | 0.00004 | 53 |