C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 16177
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120728 Gm16177-001 ENSMUSG00000082484 10090 - 8:86659318-86660035 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000120728
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000120728 0.188±0.05 0.235±0.14 0.096±0.02 0.184±0.00 0.400±0.09 0.360±0.13 0.091±0.00 0.392±0.23 0.361±0.51 0.278±0.05 0.481±0.22 0.263±0.14 0.121±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002VR CIL_0002VR_0002 CGP 8:86624043-86746006

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 701
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 701
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 701
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 701
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 701
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 549
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 599
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 494
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 651
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 562
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 555
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 327
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 460
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 497
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 333
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 409
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 342
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 1e-31 137
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 302
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 697
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 475
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 468
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 701
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 701
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 353
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 479
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 584
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 276
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 558
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 339
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 305
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 701

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