C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 8172
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000120762 Gm8172-001 ENSMUSG00000082926 10090 - X:69605496-69606245 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000120762
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000120762 0.159±0.00 0.200±0.02 0.687±0.26 0.252±0.11 0.073±0.03 0.063±0.01 0.083±0.05 0.146±0.07 0.112±0.05 0.338±0.14 0.229±0.14 0.056±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PX CIL_0007PX_0002 VISTA X:69323406-69924546

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315377 RPS6-003 protein_coding Homo_sapiens 0 859
ENST00000366455 AC007618.3-001 processed_pseudogene Homo_sapiens 0 355
ENST00000380384 RPS6-002 protein_coding Homo_sapiens 0 859
ENST00000380394 RPS6-001 protein_coding Homo_sapiens 0 867
ENST00000393214 AC004386.4-001 processed_pseudogene Homo_sapiens 0 532
ENST00000397390 RP11-146N23.1-001 processed_pseudogene Homo_sapiens 0 416
ENST00000463969 RP11-864G5.1-001 processed_pseudogene Homo_sapiens 0 586
ENST00000464444 AD000092.3-001 processed_pseudogene Homo_sapiens 0 676
ENST00000479691 RPS6P16-001 processed_pseudogene Homo_sapiens 0 505
ENST00000498815 RPS6-005 processed_transcript Homo_sapiens 0 315

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