C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L3 pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436852 RPL3P12-001 ENSG00000232496 9606 + X:122538253-122539460 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungOvaryTestisENST00000436852
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Ovary Testis
ENST00000436852 0.145±0.00 0.072±0.00 0.107±0.00 0.075±0.00 0.179±0.00 0.073±0.00 0.025±0.00 0.042±0.00 0.048±0.00 0.116±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117131 Rpl3-ps2-001 processed_pseudogene Mus_musculus 0 1131
ENSMUST00000120557 Rpl3-ps1-001 processed_pseudogene Mus_musculus 0 1127
ENSMUST00000081650 Rpl3-001 protein_coding Mus_musculus 0 1123
ENSMUST00000089501 Gm5879-201 processed_pseudogene Mus_musculus 0 1101
ENSMUST00000121389 Gm11662-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000121173 Gm11765-001 processed_pseudogene Mus_musculus 0 708
ENSMUST00000185330 RP23-267J24.4-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000188025 Rpl3-007 retained_intron Mus_musculus 0 651
ENSDART00000011251 rpl3-001 protein_coding Danio_rerio 0 621
ENSMUST00000185306 Rpl3-003 protein_coding Mus_musculus 0 468
ENSMUST00000187832 Rpl3-006 nonsense_mediated_decay Mus_musculus 0 333
ENSMUST00000187578 Rpl3-002 retained_intron Mus_musculus 0 333
ENSDART00000147048 rpl3-002 processed_transcript Danio_rerio 6e-36 156

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