C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 11960
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122068 Gm11960-001 ENSMUSG00000081974 10090 + 11:4563632-4564556 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENSMUST00000122068
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENSMUST00000122068 0.665±0.43 0.262±0.13 1.202±0.68 0.436±0.21 0.715±0.32 0.433±0.16 0.175±0.09 0.407±0.00 0.349±0.17 0.492±0.27 0.700±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 327
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 941
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 706
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 924
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 941
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 941
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 750
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 647
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 662
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 0 292
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 529
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 628
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 826
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 697
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 571
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 499
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 647
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 647
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 551
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 481
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 372
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 390
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 706
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 706
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 778
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 689
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 739
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 475
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 6.02558e-44 180
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 383
ENST00000513369 RP11-159J3.1-001 processed_pseudogene Homo_sapiens 0 652
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 702
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 760
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 689
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 411
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 826

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