C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, alpha pseudogene 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000530835 TUBAP2-001 ENSG00000214391 9606 + 11:90282560-90284172 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000530835
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000530835 0.041±0.00 0.212±0.00 0.328±0.27 0.078±0.00 0.051±0.00 0.077±0.02 0.258±0.00 0.111±0.00 0.093±0.07 0.063±0.00 0.100±0.06 0.131±0.10 0.106±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077577 Tuba1b-001 protein_coding Mus_musculus 0 2001
ENSMUST00000122404 Gm14150-001 processed_pseudogene Mus_musculus 0 1873
ENSMUST00000097014 Tuba1a-001 protein_coding Mus_musculus 0 1855
ENSMUST00000058914 Tuba1c-201 protein_coding Mus_musculus 0 1851
ENSMUST00000077991 Gm5620-001 processed_pseudogene Mus_musculus 0 1845
ENSMUST00000078739 Gm17383-201 pseudogene Mus_musculus 0 1404
ENSDART00000009277 tuba1a-001 protein_coding Danio_rerio 0 1277
ENSDART00000123518 tuba1b-001 protein_coding Danio_rerio 0 1223
ENSMUST00000186213 Tuba4a-001 protein_coding Mus_musculus 0 1194
ENSMUST00000079464 Tuba4a-002 protein_coding Mus_musculus 0 1192
ENSDART00000039443 tuba8l4-001 protein_coding Danio_rerio 0 1158
ENSDART00000053304 protein_coding Danio_rerio 0 1127
ENSMUST00000136329 Tuba1a-003 processed_transcript Mus_musculus 0 1112
ENSDART00000066177 tuba2-001 protein_coding Danio_rerio 0 1070
ENSMUST00000188593 Tuba4a-003 protein_coding Mus_musculus 0 893
ENSMUST00000119255 Gm11870-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000122283 Gm15599-001 unprocessed_pseudogene Mus_musculus 0 736
ENSMUST00000134214 Tuba1a-002 processed_transcript Mus_musculus 0 689
ENSMUST00000029297 Slc7a11-001 protein_coding Mus_musculus 0 586
ENSDART00000151271 tuba8l4-003 nonsense_mediated_decay Danio_rerio 0 525
ENSMUST00000186971 Tuba4a-008 protein_coding Mus_musculus 0 475
ENSMUST00000169182 Gm3756-201 processed_pseudogene Mus_musculus 0 446
ENSMUST00000169666 Gm6682-201 processed_pseudogene Mus_musculus 0 444
ENSMUST00000140969 Tuba1b-002 retained_intron Mus_musculus 0 398
ENSDART00000151822 tuba8l4-002 protein_coding Danio_rerio 0 263
ENSMUST00000117636 Gm14892-001 processed_pseudogene Mus_musculus 0 254

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