C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC-like kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000123580 Clk1-006 ENSMUSG00000026034 10090 - 1:58412000-58416765 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000123580
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000123580 14.881±6.10 9.581±1.07 15.278±3.17 15.211±4.13 10.639±2.74 5.366±0.49 6.848±1.03 8.158±4.78 18.761±0.90 14.016±3.11 13.068±0.00 3.020±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AX CIL_0002AX_0002 CGP 1:58392898-58424066
CIL_0002AY CIL_0002AY_0002 CGP 1:58410189-58445486

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316308 CLK4-001 protein_coding Homo_sapiens 0 399
ENST00000321356 CLK1-001 protein_coding Homo_sapiens 0 824
ENST00000409403 CLK1-006 nonsense_mediated_decay Homo_sapiens 0 418
ENST00000409769 CLK1-005 protein_coding Homo_sapiens 0 824
ENST00000432425 CLK1-003 nonsense_mediated_decay Homo_sapiens 0 824
ENST00000434813 CLK1-007 protein_coding Homo_sapiens 0 824
ENST00000461981 CLK1-002 retained_intron Homo_sapiens 0 832
ENST00000473565 CLK1-004 retained_intron Homo_sapiens 0 824
ENST00000496205 CLK1-014 retained_intron Homo_sapiens 0 375
ENST00000519132 CLK4-008 retained_intron Homo_sapiens 0.000000002 69
ENST00000519583 CLK4-013 retained_intron Homo_sapiens 0 399
ENST00000520878 CLK4-005 retained_intron Homo_sapiens 0 399
ENST00000521621 CLK4-003 nonsense_mediated_decay Homo_sapiens 0 399
ENST00000522136 CLK4-009 nonsense_mediated_decay Homo_sapiens 1e-39 169
ENST00000621181 CLK1-201 protein_coding Homo_sapiens 0 824

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