C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002AX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000082153-ENSG00000013441 CGP 9606 2:200810594-200864744
GeneTranscriptPositionBiotype
ENSG00000013441 (CLK1)
CDC-like kinase 1 		ENST00000321356 (CLK1-001) 200853009-200864699 protein_coding
ENST00000409403 (CLK1-006) 200853113-200864662 nonsense_mediated_decay
ENST00000409769 (CLK1-005) 200853098-200858166 protein_coding
ENST00000432425 (CLK1-003) 200853081-200864656 nonsense_mediated_decay
ENST00000434813 (CLK1-007) 200853196-200864561 protein_coding
ENST00000461326 (CLK1-013) 200853247-200854134 retained_intron
ENST00000461981 (CLK1-002) 200853076-200860983 retained_intron
ENST00000464454 (CLK1-016) 200853077-200854013 retained_intron
ENST00000472679 (CLK1-015) 200853082-200853995 retained_intron
ENST00000473565 (CLK1-004) 200853081-200864691 retained_intron
ENST00000481641 (CLK1-012) 200861090-200864252 retained_intron
ENST00000482590 (CLK1-010) 200861332-200864658 retained_intron
ENST00000492793 (CLK1-011) 200860965-200864657 processed_transcript
ENST00000496205 (CLK1-014) 200853332-200854886 retained_intron
ENST00000621181 (CLK1-201) 200853009-200864744 protein_coding
ENSG00000082153 (BZW1)
basic leucine zipper and W2 domains 1 		ENST00000359893 (BZW1-016) 200818326-200822550 protein_coding
ENST00000409226 (BZW1-005) 200812185-200823238 protein_coding
ENST00000409600 (BZW1-001) 200811546-200823846 protein_coding
ENST00000410110 (BZW1-008) 200811546-200818818 protein_coding
ENST00000419090 (BZW1-013) 200812989-200817188 protein_coding
ENST00000447069 (BZW1-012) 200812676-200815762 protein_coding
ENST00000450637 (BZW1-007) 200810594-200817167 protein_coding
ENST00000452206 (BZW1-002) 200811546-200818083 protein_coding
ENST00000452790 (BZW1-006) 200812356-200822243 protein_coding
ENST00000460660 (BZW1-011) 200811923-200813404 retained_intron
ENST00000463310 (BZW1-014) 200818034-200820195 retained_intron
ENST00000464483 (BZW1-010) 200811910-200815715 retained_intron
ENST00000491576 (BZW1-015) 200818272-200819124 retained_intron
ENSG00000207116 (RNU6-31P)
RNA, U6 small nuclear 31, pseudogene 		ENST00000384388 (RNU6-31P-201) 200830009-200830116 snRNA
ENSG00000224346 (AC005037.1)
 ENST00000457832 (AC005037.1-001) 200844240-200845461 processed_pseudogene
ENSG00000252759 (Y_RNA)
Y RNA 		ENST00000516950 (Y_RNA.1-912) 200863152-200863247 misc_RNA
ENSG00000260006 (RP11-469M7.1)
 ENST00000568571 (RP11-469M7.1-001) 200824673-200827338 lincRNA
CIL_0002AX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000051223-ENSMUSG00000026034 CGP 10090 1:58392898-58424066
GeneTranscriptPositionBiotype
ENSMUSG00000026034 (Clk1)
CDC-like kinase 1 		ENSMUST00000034868 (Clk1-001) 58412000-58424066 protein_coding
ENSMUST00000123580 (Clk1-006) 58412000-58416765 retained_intron
ENSMUST00000129303 (Clk1-009) 58412316-58413825 processed_transcript
ENSMUST00000129577 (Clk1-003) 58416143-58424066 retained_intron
ENSMUST00000131051 (Clk1-012) 58416910-58417426 retained_intron
ENSMUST00000135380 (Clk1-008) 58414615-58421258 retained_intron
ENSMUST00000139787 (Clk1-011) 58412000-58412861 processed_transcript
ENSMUST00000141570 (Clk1-010) 58412000-58413437 processed_transcript
ENSMUST00000147258 (Clk1-007) 58421626-58424066 retained_intron
ENSMUST00000148330 (Clk1-004) 58412000-58424066 nonsense_mediated_decay
ENSMUST00000151338 (Clk1-005) 58412000-58424066 nonsense_mediated_decay
ENSMUST00000156931 (Clk1-002) 58410189-58424066 retained_intron
ENSMUST00000186552 (Clk1-013) 58414590-58420398 retained_intron
ENSMUSG00000051223 (Bzw1)
basic leucine zipper and W2 domains 1 		ENSMUST00000050552 (Bzw1-001) 58392898-58407353 protein_coding
ENSMUST00000186949 (Bzw1-002) 58393470-58405131 protein_coding
ENSMUST00000188630 (Bzw1-003) 58393132-58405487 nonsense_mediated_decay
ENSMUST00000188898 (Bzw1-004) 58393124-58403004 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AX_0001ENSG00000013441ENST00000321356ENST00000409403ENST00000409769ENST00000432425ENST00000434813ENST00000461326ENST00000461981ENST00000464454ENST00000472679ENST00000473565ENST00000481641ENST00000482590ENST00000492793ENST00000496205ENST00000621181ENSG00000082153ENST00000359893ENST00000409226ENST00000409600ENST00000410110ENST00000419090ENST00000447069ENST00000450637ENST00000452206ENST00000452790ENST00000460660ENST00000463310ENST00000464483ENST00000491576ENSG00000207116ENST00000384388ENSG00000224346ENST00000457832ENSG00000252759ENST00000516950ENSG00000260006ENST00000568571CIL_0002AX_0002ENSMUSG00000026034ENSMUST00000034868ENSMUST00000123580ENSMUST00000129303ENSMUST00000129577ENSMUST00000131051ENSMUST00000135380ENSMUST00000139787ENSMUST00000141570ENSMUST00000147258ENSMUST00000148330ENSMUST00000151338ENSMUST00000156931ENSMUST00000186552ENSMUSG00000051223ENSMUST00000050552ENSMUST00000186949ENSMUST00000188630ENSMUST00000188898
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002AX_0001ENSG00000013441ENST00000321356ENST00000409403ENST00000409769ENST00000432425ENST00000434813ENST00000461981ENST00000473565ENSG00000082153ENST00000359893ENST00000409600ENST00000419090ENST00000452790ENST00000463310ENSG00000207116ENST00000384388ENSG00000224346ENST00000457832ENSG00000252759ENST00000516950ENSG00000260006ENST00000568571CIL_0002AX_0002ENSMUSG00000026034ENSMUST00000034868ENSMUST00000123580ENSMUST00000129577ENSMUST00000147258ENSMUST00000148330ENSMUST00000151338ENSMUST00000186552ENSMUSG00000051223ENSMUST00000050552ENSMUST00000186949ENSMUST00000188630
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000013441 ENST00000321356 N/A N/A 2.743±0.00 7.954±0.00 16.083±0.00 4.690±0.00 2.979±0.00 N/A N/A N/A 3.340±0.00 16.668±6.33 5.795±2.67 12.317±0.00
ENST00000409403 N/A N/A N/A N/A 4.487±0.00 12.630±0.00 N/A N/A 1.733±0.00 28.502±0.00 10.253±0.00 11.335±0.00 5.152±0.00 16.959±2.73
ENST00000409769 N/A N/A N/A N/A N/A N/A N/A 6.667±0.00 N/A N/A N/A N/A N/A N/A
ENST00000432425 6.600±0.00 N/A N/A 3.138±0.00 7.416±0.00 7.690±0.00 N/A 5.332±0.00 2.358±0.00 N/A N/A 9.815±3.17 3.543±0.17 10.460±0.00
ENST00000434813 4.482±0.00 12.691±0.00 N/A 4.098±0.00 5.477±0.00 19.224±0.00 9.300±0.00 8.762±0.00 2.852±0.00 49.636±0.00 19.652±0.00 N/A N/A 10.415±3.39
ENST00000461326 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000461981 N/A 7.261±0.00 N/A 1.636±0.00 4.820±0.96 N/A N/A 2.875±0.65 N/A N/A N/A 3.618±1.33 N/A N/A
ENST00000464454 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000472679 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473565 2.315±0.00 7.121±0.00 7.229±0.00 8.255±5.51 8.167±0.00 10.927±0.00 4.518±0.34 7.352±2.03 6.740±0.00 21.710±0.00 4.192±0.00 6.591±1.93 1.719±0.22 N/A
ENST00000481641 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000482590 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492793 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496205 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000621181 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000082153 ENST00000359893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 58.103±0.00 58.595±0.00 65.482±0.00
ENST00000409226 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409600 31.304±0.00 15.874±0.00 1.552±0.00 11.535±2.05 21.163±6.98 14.284±4.31 5.924±3.96 6.615±1.50 12.958±7.09 21.456±10.70 6.773±0.00 24.221±11.24 19.789±4.29 21.981±0.00
ENST00000410110 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419090 N/A N/A 8.395±0.00 23.133±0.00 37.711±0.00 27.271±0.00 6.882±0.00 22.679±0.00 19.403±0.00 30.448±0.00 3.803±0.00 48.525±0.00 N/A N/A
ENST00000447069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000450637 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452206 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452790 N/A N/A 1.451±0.00 N/A N/A 5.069±0.00 N/A N/A 4.030±0.00 N/A N/A 6.929±0.00 N/A 40.352±0.00
ENST00000460660 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000463310 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.588±0.00 N/A N/A N/A
ENST00000464483 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491576 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000207116 ENST00000384388 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.808±0.00 N/A 0.786±0.00
ENSG00000224346 ENST00000457832 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.038±0.00 N/A 0.037±0.00
ENSG00000252759 ENST00000516950 0.418±0.00 1.218±0.00 N/A 1.583±0.00 448.138±447.95 0.180±0.00 0.607±0.00 N/A N/A 0.353±0.00 N/A 0.954±0.00 N/A N/A
ENSG00000260006 ENST00000568571 2.565±0.00 3.073±0.00 N/A 2.253±0.65 1.184±0.62 0.401±0.14 0.340±0.19 0.671±0.22 1.016±0.74 0.668±0.40 0.647±0.11 0.857±0.24 0.408±0.14 0.727±0.04
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026034 ENSMUST00000034868 10.212±2.30 3.739±1.33 54.530±20.61 19.559±3.88 8.402±1.96 7.251±1.24 6.186±1.16 7.836±3.26 21.893±14.96 17.832±5.94 7.767±2.28 21.205±18.85 28.930±4.75 2.927±0.66
ENSMUST00000123580 14.881±6.10 9.581±1.07 N/A 15.278±3.17 15.211±4.13 10.639±2.74 5.366±0.49 6.848±1.03 8.158±4.78 18.761±0.90 N/A 14.016±3.11 13.068±0.00 3.020±0.19
ENSMUST00000129303 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129577 6.680±0.62 4.330±0.83 26.920±14.02 10.635±7.51 9.289±2.71 7.104±0.85 4.799±0.00 4.993±1.25 9.919±6.38 13.008±3.68 2.715±0.00 10.835±5.85 5.927±1.07 2.567±0.35
ENSMUST00000131051 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135380 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000141570 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147258 N/A N/A N/A 159.299±0.00 N/A N/A N/A N/A N/A N/A N/A 705.448±0.00 266.632±5.13 98.256±0.00
ENSMUST00000148330 9.937±0.44 N/A 51.186±14.58 26.177±9.53 12.773±3.76 6.585±2.31 7.717±2.94 6.198±1.68 13.288±6.66 12.040±0.00 7.585±1.18 25.681±18.35 12.578±0.22 8.085±1.02
ENSMUST00000151338 N/A N/A N/A 13.275±0.00 23.412±0.00 N/A N/A N/A 6.000±2.63 12.294±0.00 N/A 8.856±2.71 N/A 5.660±0.00
ENSMUST00000156931 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000186552 N/A 8.644±1.22 N/A 51.388±0.00 N/A N/A N/A N/A N/A N/A N/A 144.163±60.29 63.661±22.51 23.084±0.00
ENSMUSG00000051223 ENSMUST00000050552 7.872±7.20 9.555±1.63 31.125±9.35 57.073±2.76 18.304±1.57 14.160±4.96 4.299±2.75 6.876±7.40 18.700±17.14 2.392±0.00 12.435±0.85 27.465±10.77 46.844±20.63 6.676±2.64
ENSMUST00000186949 N/A 2.716±0.22 N/A N/A N/A 4.823±0.00 N/A N/A N/A N/A N/A 13.647±2.73 N/A 59.430±2.80
ENSMUST00000188630 N/A N/A N/A 11.596±0.00 N/A N/A N/A N/A N/A N/A N/A 68.319±0.00 38.206±12.63 10.086±0.00
ENSMUST00000188898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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