C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000468880 KRT19-005 ENSG00000171345 9606 - 17:41523714-41524993 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalHeartMuscleENST00000468880
Transcript ID Adrenal Heart Muscle
ENST00000468880 0.077±0.00 0.154±0.00 0.196±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000G CGP 17:41513743-41528308
CIL_0000TN CIL_0000TN_0004 CGP 17:41523617-41572058

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 440
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 440
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 274
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 268
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 268
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 250
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 0 215
ENSMUST00000148502 Krt15-002 retained_intron Mus_musculus 0 211
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 211
ENSMUST00000128934 Krt13-002 processed_transcript Mus_musculus 1.4013e-45 187
ENSMUST00000125888 Krt19-003 processed_transcript Mus_musculus 3e-22 110
ENSMUST00000121423 Gm11597-001 unprocessed_pseudogene Mus_musculus 0.000001 58

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