C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 19
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000593096 KRT19-007 ENSG00000171345 9606 - 17:41523875-41525445 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000593096
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000593096 0.139±0.00 0.232±0.00 10.901±0.00 7.732±0.00 2.029±0.00 41.565±0.00 12.306±0.00 24.094±16.67 2.536±0.00 147.299±154.48 171.564±0.00 6.056±4.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000G CGP 17:41513743-41528308
CIL_0000TN CIL_0000TN_0004 CGP 17:41523617-41572058

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 682
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 682
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 363
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 363
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 359
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 348
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 274
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 0 267
ENSMUST00000125888 Krt19-003 processed_transcript Mus_musculus 0 237
ENSMUST00000148502 Krt15-002 retained_intron Mus_musculus 0 224
ENSMUST00000128934 Krt13-002 processed_transcript Mus_musculus 0 222

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