C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: scaffold attachment factor B2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000134741 Safb2-005 ENSMUSG00000042625 10090 - 17:56570081-56575519 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartLiverMusclePlacentaENSMUST00000134741
Transcript ID Adipose Brain Breast Heart Liver Muscle Placenta
ENSMUST00000134741 5.269±1.70 5.487±1.47 4.062±0.89 2.658±0.31 4.330±0.02 3.106±0.40 10.971±0.16

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003JF CIL_0003JF_0002 CGP 17:56511248-56584585
CIL_0003UZ CIL_0003UZ_0002 CGP 17:56560965-56606294

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252542 SAFB2-001 protein_coding Homo_sapiens 2e-40 172
ENST00000292123 SAFB-003 protein_coding Homo_sapiens 9.99995e-41 172
ENST00000454510 SAFB-004 protein_coding Homo_sapiens 9.99995e-41 172
ENST00000588852 SAFB-002 protein_coding Homo_sapiens 9.99995e-41 172
ENST00000589863 SAFB-005 nonsense_mediated_decay Homo_sapiens 9.99995e-41 172
ENST00000592224 SAFB-001 protein_coding Homo_sapiens 9.99995e-41 172
ENST00000592599 SAFB2-003 retained_intron Homo_sapiens 0 532
ENST00000592707 SAFB-009 retained_intron Homo_sapiens 4.00001e-41 172

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