C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: myosin, heavy polypeptide 8, skeletal muscle, perinatal
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139052 Myh8-004 ENSMUSG00000055775 10090 + 11:67279991-67292100 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryTestisENSMUST00000139052
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000139052 0.026±0.01 0.062±0.02 0.051±0.02 0.054±0.03 0.009±0.00 0.027±0.01 0.006±0.00 0.026±0.01 0.061±0.04 0.032±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000098067 myhz1.2-201 protein_coding Danio_rerio 0 601
ENSDART00000131983 myhz1.2-001 protein_coding Danio_rerio 0 601
ENSDART00000130531 myhz1.3-202 protein_coding Danio_rerio 0 601
ENSDART00000122889 myhz1.3-001 protein_coding Danio_rerio 0 601
ENSDART00000098072 myhz1.1-202 protein_coding Danio_rerio 0 595
ENSDART00000098060 myhz1.1-201 protein_coding Danio_rerio 0 595
ENSDART00000123003 myhz1.1-001 protein_coding Danio_rerio 0 595
ENSDART00000051361 myhz2-201 protein_coding Danio_rerio 0 590
ENSDART00000126873 myhz2-001 protein_coding Danio_rerio 0 590
ENSDART00000075210 protein_coding Danio_rerio 0 582
ENSDART00000139917 myha-001 protein_coding Danio_rerio 0 579
ENSDART00000051362 myhc4-201 protein_coding Danio_rerio 0 579
ENSDART00000125917 myhc4-001 protein_coding Danio_rerio 0 579
ENSDART00000026257 myhb-201 protein_coding Danio_rerio 0 575
ENSDART00000156295 myhb-001 protein_coding Danio_rerio 0 575
ENSDART00000109263 myhz1.1-203 protein_coding Danio_rerio 0 573
ENSDART00000123920 MYH13 (5 of 10)-202 protein_coding Danio_rerio 0 568
ENSDART00000130036 MYH13 (5 of 10)-201 protein_coding Danio_rerio 0 568
ENSDART00000051360 MYH13 (3 of 10)-201 protein_coding Danio_rerio 0 560
ENSDART00000137082 CU633479.6-201 protein_coding Danio_rerio 0 501
ENSDART00000135233 si:ch211-24n20.3-201 protein_coding Danio_rerio 0 496
ENSDART00000150162 si:ch211-24n20.3-001 protein_coding Danio_rerio 0 496
ENSDART00000133338 CR450736.2-201 protein_coding Danio_rerio 0 488
ENSDART00000137989 CU633479.5-201 protein_coding Danio_rerio 0 488
ENSDART00000066527 smyhc3-201 protein_coding Danio_rerio 0 473
ENSDART00000150060 smyhc3-001 protein_coding Danio_rerio 0 473
ENSDART00000045928 smyhc1-202 protein_coding Danio_rerio 0 466
ENSDART00000004536 smyhc1-201 protein_coding Danio_rerio 0 466
ENSDART00000056853 smyhc1-203 protein_coding Danio_rerio 0 466
ENSDART00000099532 vmhc-001 protein_coding Danio_rerio 0 455
ENSDART00000056849 smyhc2-001 protein_coding Danio_rerio 0 444
ENSDART00000128784 vmhcl-001 protein_coding Danio_rerio 0 438
ENSDART00000078958 vmhcl-201 protein_coding Danio_rerio 0 431
ENSDART00000124862 smyhc2-003 protein_coding Danio_rerio 0 327
ENSDART00000123565 vmhcl-004 protein_coding Danio_rerio 0 272
ENSDART00000004854 myh11b-201 protein_coding Danio_rerio 2.94273e-44 185
ENSDART00000148622 myh11b-001 protein_coding Danio_rerio 2.94273e-44 185
ENSDART00000141922 vmhcl-002 protein_coding Danio_rerio 1.00053e-42 180
ENSDART00000147211 smyhc2-002 retained_intron Danio_rerio 5e-37 161
ENST00000226207 MYH1-001 protein_coding Homo_sapiens 0 1118
ENST00000245503 MYH2-001 protein_coding Homo_sapiens 0 979
ENST00000252172 MYH13-001 protein_coding Homo_sapiens 0 920
ENST00000255381 MYH4-001 protein_coding Homo_sapiens 0 1007
ENST00000262873 MYH7B-001 protein_coding Homo_sapiens 0 424
ENST00000355349 MYH7-001 protein_coding Homo_sapiens 0 593
ENST00000356287 MYH6-001 protein_coding Homo_sapiens 0 621
ENST00000376970 MYH14-202 protein_coding Homo_sapiens 3e-36 159
ENST00000397183 MYH2-201 protein_coding Homo_sapiens 0 979
ENST00000403437 MYH8-001 protein_coding Homo_sapiens 0 1162
ENST00000405093 MYH6-201 protein_coding Homo_sapiens 0 621
ENST00000413734 MYH16-003 processed_transcript Homo_sapiens 0 383
ENST00000418404 MYH13-003 protein_coding Homo_sapiens 0 920
ENST00000420805 MYH2-002 protein_coding Homo_sapiens 0 339
ENST00000425460 MYH14-203 protein_coding Homo_sapiens 3e-36 159
ENST00000439784 MYH16-001 unitary_pseudogene Homo_sapiens 0 483
ENST00000440075 MYH14-204 protein_coding Homo_sapiens 2e-26 126
ENST00000453194 MYH16-002 processed_transcript Homo_sapiens 0 222
ENST00000470929 MYH7B-002 retained_intron Homo_sapiens 2e-21 108
ENST00000532183 MYH2-006 protein_coding Homo_sapiens 0 979
ENST00000557461 MYH6-002 retained_intron Homo_sapiens 0 621
ENST00000578017 MYH2-009 protein_coding Homo_sapiens 0 521
ENST00000579489 MYH3-004 retained_intron Homo_sapiens 0 422
ENST00000583535 MYH3-001 protein_coding Homo_sapiens 0 880
ENST00000596571 MYH14-008 protein_coding Homo_sapiens 2e-36 159
ENST00000598205 MYH14-006 protein_coding Homo_sapiens 2e-36 159
ENST00000599920 MYH14-007 protein_coding Homo_sapiens 1e-36 159
ENST00000601313 MYH14-001 protein_coding Homo_sapiens 3e-36 159
ENST00000618182 MYH7B-201 protein_coding Homo_sapiens 0 424
ENST00000621918 MYH13-201 protein_coding Homo_sapiens 0 920
ENST00000622564 MYH2-202 protein_coding Homo_sapiens 0 979

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