C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cytotoxic granule-associated RNA binding protein 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000139928 Tia1-014 ENSMUSG00000071337 10090 + 6:86404296-86419794 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; TestisENSMUST00000139928
Transcript ID Testis
ENSMUST00000139928 4.019±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00089T CIL_00089T_0002 VISTA 6:86179085-86780169

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000282574 TIA1-006 protein_coding Homo_sapiens 0 562
ENST00000361692 TIA1-023 protein_coding Homo_sapiens 0 353
ENST00000415783 TIA1-002 protein_coding Homo_sapiens 0 542
ENST00000416149 TIA1-004 protein_coding Homo_sapiens 0 496
ENST00000433529 TIA1-001 protein_coding Homo_sapiens 0 603
ENST00000445587 TIA1-003 protein_coding Homo_sapiens 0 520
ENST00000454815 TIA1-013 protein_coding Homo_sapiens 3e-33 147
ENST00000470096 C2orf42-015 processed_transcript Homo_sapiens 9.99995e-41 171
ENST00000474809 TIA1-009 nonsense_mediated_decay Homo_sapiens 0 603
ENST00000477044 TIA1-008 nonsense_mediated_decay Homo_sapiens 0 763
ENST00000481650 TIA1-011 retained_intron Homo_sapiens 0 510
ENST00000496452 TIA1-010 retained_intron Homo_sapiens 0 549

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