C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L13a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477613 RPL13A-008 ENSG00000142541 9606 + 19:49487625-49491889 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonMuscleOvaryPlacentaTestisENST00000477613
Transcript ID Adipose Adrenal Brain Breast Colon Muscle Ovary Placenta Testis
ENST00000477613 850.600±0.00 897.298±0.00 62.984±0.00 755.718±0.00 664.961±0.00 139.655±0.00 1967.370±0.00 1018.371±142.80 394.448±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000150350 Rpl13a-001 protein_coding Mus_musculus 0 678
ENSMUST00000124300 Rpl13a-011 protein_coding Mus_musculus 0 665
ENSMUST00000117851 Gm11478-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000102669 Rpl13a-009 nonsense_mediated_decay Mus_musculus 0 603
ENSMUST00000125074 Rpl13a-006 processed_transcript Mus_musculus 0 568
ENSMUST00000142239 Rpl13a-010 processed_transcript Mus_musculus 0 294
ENSMUST00000131697 Rpl13a-005 retained_intron Mus_musculus 0 246
ENSMUST00000141807 Rpl13a-002 processed_transcript Mus_musculus 0 243
ENSMUST00000152970 Rpl13a-003 retained_intron Mus_musculus 4e-26 122
ENSMUST00000138887 Rpl13a-007 retained_intron Mus_musculus 6e-24 115

Loading