C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC-like kinase 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148330 Clk1-004 ENSMUSG00000026034 10090 - 1:58412000-58424066 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000148330
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000148330 9.937±0.44 51.186±14.58 26.177±9.53 12.773±3.76 6.585±2.31 7.717±2.94 6.198±1.68 13.288±6.66 12.040±0.00 7.585±1.18 25.681±18.35 12.578±0.22 8.085±1.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002AX CIL_0002AX_0002 CGP 1:58392898-58424066
CIL_0002AY CIL_0002AY_0002 CGP 1:58410189-58445486

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004674 IDA protein serine/threonine kinase activity
GO:0004712 IEA protein serine/threonine/tyrosine kinase activity
GO:0004713 IDA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0018105 IDA peptidyl-serine phosphorylation
GO:0018107 IDA peptidyl-threonine phosphorylation
GO:0018108 IDA peptidyl-tyrosine phosphorylation
GO:0046777 IDA protein autophosphorylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000316308 CLK4-001 protein_coding Homo_sapiens 0 621
ENST00000321356 CLK1-001 protein_coding Homo_sapiens 0 1279
ENST00000409403 CLK1-006 nonsense_mediated_decay Homo_sapiens 0 771
ENST00000409769 CLK1-005 protein_coding Homo_sapiens 0 1186
ENST00000432425 CLK1-003 nonsense_mediated_decay Homo_sapiens 0 1609
ENST00000434813 CLK1-007 protein_coding Homo_sapiens 0 1279
ENST00000461981 CLK1-002 retained_intron Homo_sapiens 0 824
ENST00000473565 CLK1-004 retained_intron Homo_sapiens 0 1280
ENST00000496205 CLK1-014 retained_intron Homo_sapiens 0 375
ENST00000519132 CLK4-008 retained_intron Homo_sapiens 0.000000002 69
ENST00000519583 CLK4-013 retained_intron Homo_sapiens 0 623
ENST00000520878 CLK4-005 retained_intron Homo_sapiens 0 621
ENST00000521621 CLK4-003 nonsense_mediated_decay Homo_sapiens 0 621
ENST00000522136 CLK4-009 nonsense_mediated_decay Homo_sapiens 1e-39 169
ENST00000621181 CLK1-201 protein_coding Homo_sapiens 0 1605

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