C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: poly(A) binding protein, cytoplasmic 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000156793 Pabpc1-006 ENSMUSG00000022283 10090 - 15:36598301-36602346 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainOvaryPlacentaENSMUST00000156793
Transcript ID Brain Ovary Placenta
ENSMUST00000156793 61.778±0.00 302.364±245.13 389.553±301.52

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000281589 PABPC3-001 protein_coding Homo_sapiens 0 965
ENST00000318607 PABPC1-001 protein_coding Homo_sapiens 0 1125
ENST00000471997 PABPC1P2-001 processed_pseudogene Homo_sapiens 0 802
ENST00000506347 PABPC1P1-001 processed_pseudogene Homo_sapiens 0 654
ENST00000517403 PABPC1-007 protein_coding Homo_sapiens 0 342
ENST00000517921 PABPC1-010 retained_intron Homo_sapiens 0.000000000003 77
ENST00000518716 PABPC1-022 retained_intron Homo_sapiens 0 623
ENST00000519004 PABPC1-002 protein_coding Homo_sapiens 0 1125
ENST00000519100 PABPC1-012 protein_coding Homo_sapiens 0 941
ENST00000519596 PABPC1-013 processed_transcript Homo_sapiens 0 941
ENST00000519622 PABPC1-024 nonsense_mediated_decay Homo_sapiens 0 518
ENST00000522387 PABPC1-003 protein_coding Homo_sapiens 0 1125
ENST00000523555 PABPC1-009 protein_coding Homo_sapiens 0.0000000003 69
ENST00000523636 PABPC1-014 nonsense_mediated_decay Homo_sapiens 0 665
ENST00000539977 PABPC1P4-001 processed_pseudogene Homo_sapiens 0 987
ENST00000610907 PABPC1-201 protein_coding Homo_sapiens 0 1110

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