C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 86
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000293525 KRT86-201 ENSG00000170442 9606 + 12:52301865-52309163 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastKidneyLiverLungOvaryPlacentaTestisENST00000293525
Transcript ID Adrenal Brain Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000293525 0.029±0.00 0.229±0.00 0.273±0.13 0.128±0.00 0.028±0.00 0.077±0.00 0.064±0.05 2.052±1.45 0.485±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006TB CIL_0006TB_0001 CGP 12:52168996-52252186
CIL_00033Q CIL_00033Q_0004 CGP 12:52232520-52309163
CIL_00033Q CIL_00033Q_0009 CGP 12:52249300-52309163

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005615 IDA extracellular space
GO:0005882 IEA intermediate filament
GO:0045095 IEA keratin filament
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088049 Krt86-201 protein_coding Mus_musculus 0 1687
ENSMUST00000061185 Krt81-201 protein_coding Mus_musculus 0 1496
ENSMUST00000081945 Krt83-201 protein_coding Mus_musculus 0 1469
ENSMUST00000023718 5430421N21Rik-001 protein_coding Mus_musculus 0 1452
ENSMUST00000159029 5430421N21Rik-002 retained_intron Mus_musculus 0 701
ENSMUST00000023713 Krt82-201 protein_coding Mus_musculus 0 472
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 333
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 322
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 298
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 2e-23 115
ENSMUST00000077196 Krt80-201 protein_coding Mus_musculus 6e-23 113
ENSMUST00000077902 Gfap-201 protein_coding Mus_musculus 0.0000000001 73
ENSMUST00000067444 Gfap-001 protein_coding Mus_musculus 0.0000000001 73
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.00000002 66
ENSDART00000064983 krt1-c5-201 protein_coding Danio_rerio 0.0000002 62
ENSDART00000139066 krt1-c5-001 protein_coding Danio_rerio 0.0000002 62

Loading