C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
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| Description: | polypyrimidine tract binding protein 1 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENSMUST00000164385  |
Ptbp1-018 |
ENSMUSG00000006498 |
10090 | + |
10:79861738-79863050  |
retained_intron |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0008XG | CIL_0008XG_0002 | VISTA | 10:79539861-80142369 |
| CIL_00051Q | CIL_00051Q_0002 | CGP | 10:79821021-79864771 |
| CIL_00008B | CIL_00008B_0002 | CGP | 10:79854427-79874634 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENST00000349038
|
PTBP1-003 | protein_coding | Homo_sapiens | 0 | 514 |
|
ENST00000350092
|
PTBP1-019 | protein_coding | Homo_sapiens | 0 | 514 |
|
ENST00000356948
|
PTBP1-001 | protein_coding | Homo_sapiens | 0 | 514 |
|
ENST00000394601
|
PTBP1-002 | protein_coding | Homo_sapiens | 0 | 514 |
|
ENST00000554374
|
PTBP1P-001 | processed_pseudogene | Homo_sapiens | 0 | 412 |
|
ENST00000585856
|
PTBP1-007 | retained_intron | Homo_sapiens | 0 | 455 |
|
ENST00000585932
|
PTBP1-014 | nonsense_mediated_decay | Homo_sapiens | 0 | 455 |
|
ENST00000585956
|
PTBP1-016 | protein_coding | Homo_sapiens | 0 | 220 |
|
ENST00000586944
|
PTBP1-004 | retained_intron | Homo_sapiens | 0 | 900 |
|
ENST00000587191
|
PTBP1-017 | protein_coding | Homo_sapiens | 0 | 398 |
|
ENST00000621737
|
PTBP1-015 | nonsense_mediated_decay | Homo_sapiens | 0 | 455 |
