C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 6498
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000181413 Gm6498-002 ENSMUSG00000063885 10090 + 14:48227201-48228206 transcribed_processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000181413
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000181413 0.178±0.03 0.090±0.02 0.035±0.00 0.085±0.05 0.357±0.29 0.224±0.16 0.114±0.01 0.170±0.11 0.056±0.04 0.216±0.09 0.029±0.00 0.260±0.22 0.036±0.02 0.139±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000604 CIL_000604_0003 CGP 14:47648448-48260883
CIL_000601 CIL_000601_0003 CGP 14:48120869-48515135

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 1005
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 793
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 1003
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 1005
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 1005
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 789
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 787
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 732
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 725
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 929
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 835
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 532
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 704
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 503
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 584
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 667
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 536
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 544
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 682
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 957
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 475
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 793
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 793
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 734
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 785
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 789
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 599
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 0 422
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 839
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 773
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 496
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 688
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 604
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 604
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 924

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