C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 9658
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000182757 Gm9658-001 ENSMUSG00000098002 10090 - 15:43217150-43218161 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverMuscleOvaryPlacentaENSMUST00000182757
Transcript ID Adipose Adrenal Brain Breast Liver Muscle Ovary Placenta
ENSMUST00000182757 0.053±0.02 0.060±0.00 0.090±0.08 0.251±0.17 0.032±0.01 0.050±0.00 0.082±0.00 0.072±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T1 CIL_0004T1_0003 CGP 15:43020811-43282736

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000058384 gapdhs-001 protein_coding Danio_rerio 0 324
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 979
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 782
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 961
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 979
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 979
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 723
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 874
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 708
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 691
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 902
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 780
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 640
ENST00000434621 GAPDHP68-001 processed_pseudogene Homo_sapiens 0 739
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 651
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 534
ENST00000445880 RP1-52D1.1-001 processed_pseudogene Homo_sapiens 2e-30 134
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 0 377
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 948
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 518
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 782
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 782
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 460
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 660
ENST00000505218 GAPDHP40-001 processed_pseudogene Homo_sapiens 0 678
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 0 582
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 268
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 761
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 778
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 902

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