C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000081215 krt8-001 ENSDARG00000058358 7955 - 23:10355854-10360516 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000081215
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000081215 35.943±37.19 458.773±324.17 73.236±97.40 159.822±0.00 130.662±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_0002 CGP 23:10280085-10360516

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005634 IEA nucleus
GO:0005654 IEA nucleoplasm
GO:0005737 ISS cytoplasm
GO:0005882 IEA intermediate filament
GO:0016363 IEA nuclear matrix
GO:0045095 IEA keratin filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000252250 KRT6C-001 protein_coding Homo_sapiens 0 311
ENST00000252252 KRT6B-001 protein_coding Homo_sapiens 0 289
ENST00000253408 GFAP-001 protein_coding Homo_sapiens 0.00000000004 75
ENST00000293308 KRT8-002 protein_coding Homo_sapiens 0 538
ENST00000313234 KRT80-001 protein_coding Homo_sapiens 7e-20 104
ENST00000330722 KRT6A-001 protein_coding Homo_sapiens 0 339
ENST00000394815 KRT80-002 protein_coding Homo_sapiens 7e-20 104
ENST00000432100 KRT8P30-001 processed_pseudogene Homo_sapiens 0.000000001 68
ENST00000435360 GFAP-002 protein_coding Homo_sapiens 0.00000000002 75
ENST00000451609 KRT8P37-001 processed_pseudogene Homo_sapiens 0 337
ENST00000466011 KRT80-003 retained_intron Homo_sapiens 6e-20 104
ENST00000515599 KRT8P48-001 processed_pseudogene Homo_sapiens 0 350
ENST00000519669 KRT8P3-001 processed_pseudogene Homo_sapiens 0 521
ENST00000546583 KRT8-005 retained_intron Homo_sapiens 0 265
ENST00000546897 KRT8-003 protein_coding Homo_sapiens 0 538
ENST00000547031 KRT8-020 retained_intron Homo_sapiens 0 337
ENST00000549754 KRT6A-003 retained_intron Homo_sapiens 9.00054e-42 174
ENST00000549898 KRT6A-002 retained_intron Homo_sapiens 6.02558e-44 182
ENST00000550170 KRT8-008 retained_intron Homo_sapiens 0 265
ENST00000552150 KRT8-004 protein_coding Homo_sapiens 0 538
ENST00000552551 KRT8-001 protein_coding Homo_sapiens 0 538
ENST00000556193 KRT8P2-001 processed_pseudogene Homo_sapiens 0.0000000000003 81
ENST00000585543 GFAP-014 retained_intron Homo_sapiens 0.000000000008 75
ENST00000586793 GFAP-024 protein_coding Homo_sapiens 0.00000000002 75
ENST00000588640 GFAP-012 processed_transcript Homo_sapiens 0.000000000008 75
ENST00000592320 GFAP-005 protein_coding Homo_sapiens 0.00000000004 73

Loading