C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000137533 krt8-003 ENSDARG00000058358 7955 - 23:10356435-10357327 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyENSDART00000137533
Transcript ID Brain Heart Kidney
ENSDART00000137533 0.272±0.00 2.295±0.98 0.406±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033Q CIL_00033Q_0002 CGP 23:10280085-10360516

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000253408 GFAP-001 protein_coding Homo_sapiens 0.00000000004 75
ENST00000293308 KRT8-002 protein_coding Homo_sapiens 4e-24 117
ENST00000313234 KRT80-001 protein_coding Homo_sapiens 2e-20 106
ENST00000394815 KRT80-002 protein_coding Homo_sapiens 2e-20 106
ENST00000432100 KRT8P30-001 processed_pseudogene Homo_sapiens 0.000000001 68
ENST00000435360 GFAP-002 protein_coding Homo_sapiens 0.00000000002 75
ENST00000451609 KRT8P37-001 processed_pseudogene Homo_sapiens 0.000000000005 77
ENST00000466011 KRT80-003 retained_intron Homo_sapiens 2e-20 106
ENST00000515599 KRT8P48-001 processed_pseudogene Homo_sapiens 0.000000000000008 86
ENST00000519669 KRT8P3-001 processed_pseudogene Homo_sapiens 2e-27 128
ENST00000546583 KRT8-005 retained_intron Homo_sapiens 7e-24 117
ENST00000546897 KRT8-003 protein_coding Homo_sapiens 4e-24 117
ENST00000547031 KRT8-020 retained_intron Homo_sapiens 2e-25 121
ENST00000550170 KRT8-008 retained_intron Homo_sapiens 5e-24 117
ENST00000552150 KRT8-004 protein_coding Homo_sapiens 4e-24 117
ENST00000552551 KRT8-001 protein_coding Homo_sapiens 5e-24 117
ENST00000556193 KRT8P2-001 processed_pseudogene Homo_sapiens 0.0000000000003 81
ENST00000585543 GFAP-014 retained_intron Homo_sapiens 0.000000000008 75
ENST00000586793 GFAP-024 protein_coding Homo_sapiens 0.00000000002 75
ENST00000588640 GFAP-012 processed_transcript Homo_sapiens 0.000000000008 75
ENST00000592320 GFAP-005 protein_coding Homo_sapiens 0.00000000004 73

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