C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000259_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000124562-ENSG00000065060 CGP 9606 6:34757406-34883138
GeneTranscriptPositionBiotype
ENSG00000064995 (TAF11)
TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 28kDa
ENST00000361288 (TAF11-001) 34877778-34888089 protein_coding
ENST00000420584 (TAF11-201) 34877778-34888071 protein_coding
ENSG00000065060 (UHRF1BP1)
UHRF1 binding protein 1
ENST00000192788 (UHRF1BP1-001) 34792080-34877514 protein_coding
ENST00000452449 (UHRF1BP1-201) 34792015-34883138 protein_coding
ENSG00000124562 (SNRPC)
small nuclear ribonucleoprotein polypeptide C
ENST00000244520 (SNRPC-001) 34757406-34773794 protein_coding
ENST00000374017 (SNRPC-002) 34757554-34773794 protein_coding
ENST00000374018 (SNRPC-003) 34757525-34773714 protein_coding
ENST00000474635 (SNRPC-004) 34757912-34773532 processed_transcript
ENSG00000206717 (Y_RNA)
Y RNA
ENST00000383990 (Y_RNA.1-611) 34821445-34821542 misc_RNA
CIL_000259_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024217-ENSMUSG00000039512 CGP 10090 17:27839974-27900040
GeneTranscriptPositionBiotype
ENSMUSG00000024217 (Snrpc)
U1 small nuclear ribonucleoprotein C
ENSMUST00000071006 (Snrpc-001) 27839974-27851964 protein_coding
ENSMUST00000137581 (Snrpc-002) 27840134-27851968 retained_intron
ENSMUSG00000039512 (Uhrf1bp1)
UHRF1 (ICBP90) binding protein 1
ENSMUST00000114849 (Uhrf1bp1-001) 27856490-27900040 protein_coding
ENSMUST00000130810 (Uhrf1bp1-002) 27857243-27879761 processed_transcript
ENSMUST00000137825 (Uhrf1bp1-003) 27890105-27895366 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000259_0001ENSG00000064995ENST00000361288ENST00000420584ENSG00000065060ENST00000192788ENST00000452449ENSG00000124562ENST00000244520ENST00000374017ENST00000374018ENST00000474635ENSG00000206717ENST00000383990CIL_000259_0002ENSMUSG00000024217ENSMUST00000071006ENSMUST00000137581ENSMUSG00000039512ENSMUST00000114849ENSMUST00000130810ENSMUST00000137825
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000259_0001ENSG00000064995ENST00000361288ENST00000420584ENSG00000065060ENST00000192788ENST00000452449ENSG00000124562ENST00000244520ENST00000374017ENST00000374018ENST00000474635ENSG00000206717ENST00000383990CIL_000259_0002ENSMUSG00000024217ENSMUST00000071006ENSMUST00000137581ENSMUSG00000039512ENSMUST00000114849ENSMUST00000137825
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000064995 ENST00000361288 6.700±0.00 12.946±0.00 N/A 6.630±1.71 6.923±2.97 7.044±3.22 4.170±2.69 5.940±2.76 3.845±1.58 4.509±2.94 5.942±0.00 10.577±3.64 14.099±0.84 18.004±3.06
ENST00000420584 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.936±0.00 N/A N/A N/A
ENSG00000065060 ENST00000192788 2.497±0.00 3.273±0.00 N/A 1.225±0.81 2.379±1.52 0.878±0.19 2.437±1.98 2.440±0.00 0.902±0.03 2.138±0.00 3.612±0.00 1.836±0.97 1.553±0.39 5.561±0.55
ENST00000452449 N/A N/A N/A N/A N/A N/A 0.705±0.00 N/A N/A 1.029±0.00 0.713±0.00 N/A N/A N/A
ENSG00000124562 ENST00000244520 17.711±0.00 40.440±0.00 2.299±0.00 15.239±6.49 12.589±5.86 11.041±2.64 25.564±12.81 16.740±3.82 15.352±9.82 10.634±6.58 22.046±8.80 36.853±15.39 45.852±12.61 48.170±10.82
ENST00000374017 N/A N/A 1.390±0.00 N/A N/A N/A N/A N/A 0.824±0.00 N/A N/A N/A N/A N/A
ENST00000374018 3.394±0.00 N/A N/A 8.121±0.00 5.730±3.73 16.167±0.00 17.104±0.00 9.853±0.00 3.596±0.00 5.506±3.51 5.269±0.00 29.185±17.56 52.896±2.16 11.251±0.00
ENST00000474635 N/A N/A 4.996±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000206717 ENST00000383990 N/A N/A N/A N/A N/A N/A 0.193±0.00 N/A 0.546±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024217 ENSMUST00000071006 16.660±3.65 58.052±2.36 30.330±1.12 34.585±19.90 29.123±12.97 34.741±2.56 14.699±3.58 19.203±1.58 41.319±31.49 26.636±1.87 33.554±1.75 41.933±6.01 57.812±32.30 55.693±22.89
ENSMUST00000137581 0.585±0.11 N/A 0.609±0.01 0.739±0.37 0.484±0.19 N/A 0.211±0.00 N/A N/A 0.811±0.00 N/A 0.472±0.06 0.213±0.05 0.180±0.00
ENSMUSG00000039512 ENSMUST00000114849 6.324±1.44 7.313±1.62 1.455±0.10 5.153±0.28 5.129±2.02 2.249±0.56 1.962±0.86 3.567±0.86 2.617±0.78 3.408±0.83 3.731±1.21 7.364±2.98 2.621±0.62 1.267±0.32
ENSMUST00000130810 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000137825 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.689±0.00

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