Transcript Info |
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Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 | |||||
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Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000377808 | SMARCE1-008 | ENSG00000073584 | 9606 | - | 17:40628779-40647818 | protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
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Region ID | Sub-Region | Region Type | Position |
CIL_0005QY | CIL_0005QY_0001 | CGP | 17:40553769-40648508 |
CIL_0004QH | CIL_0004QH_0001 | CGP | 17:40624962-40665141 |
Gene Ontology | ||
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GO ID | Evidence Type | GO Description |
GO:0000228 | TAS | nuclear chromosome |
GO:0000790 | IDA | nuclear chromatin |
GO:0000978 | IDA | RNA polymerase II core promoter proximal region sequence-specific DNA binding |
GO:0000980 | IDA | RNA polymerase II distal enhancer sequence-specific DNA binding |
GO:0003682 | TAS | chromatin binding |
GO:0003713 | NAS | transcription coactivator activity |
GO:0005515 | IPI | protein binding |
GO:0005634 | IDA | nucleus |
GO:0006337 | IDA | nucleosome disassembly |
GO:0006338 | IDA | chromatin remodeling |
GO:0006357 | NAS | regulation of transcription from RNA polymerase II promoter |
GO:0007399 | IEA | nervous system development |
GO:0008080 | IDA | N-acetyltransferase activity |
GO:0008152 | IDA | metabolic process |
GO:0016514 | IDA | SWI/SNF complex |
GO:0016922 | IPI | ligand-dependent nuclear receptor binding |
GO:0017053 | IPI | transcriptional repressor complex |
GO:0031492 | IDA | nucleosomal DNA binding |
GO:0043044 | IDA | ATP-dependent chromatin remodeling |
GO:0043234 | IDA | protein complex |
GO:0045892 | IDA | negative regulation of transcription, DNA-templated |
GO:0047485 | IPI | protein N-terminus binding |
GO:0071564 | ISS | npBAF complex |
GO:0071565 | ISS | nBAF complex |
Homologs | |||||
ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
ENSMUST00000103133 | Smarce1-001 | protein_coding | Mus_musculus | 0 | 1218 |
ENSMUST00000180067 | Gm1815-201 | processed_pseudogene | Mus_musculus | 0 | 1195 |
ENSMUST00000178171 | Gm8494-201 | processed_pseudogene | Mus_musculus | 0 | 952 |
ENSMUST00000155062 | Smarce1-005 | processed_transcript | Mus_musculus | 0 | 608 |
ENSMUST00000128707 | Smarce1-004 | processed_transcript | Mus_musculus | 0 | 374 |
ENSMUST00000135040 | Smarce1-003 | processed_transcript | Mus_musculus | 0 | 329 |
ENSMUST00000156160 | Smarce1-006 | processed_transcript | Mus_musculus | 0 | 268 |
ENSMUST00000128215 | Smarce1-002 | processed_transcript | Mus_musculus | 0 | 241 |