C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 35
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000398869 RPL5P35-001 ENSG00000214727 9606 - 22:49757627-49758980 unprocessed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000398869
Transcript ID Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000398869 0.169±0.00 0.047±0.00 0.120±0.00 0.127±0.00 0.077±0.00 0.042±0.00 0.057±0.00 0.028±0.00 0.080±0.00 0.153±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 761
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 761
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 761
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 728
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 641
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 527
ENSMUST00000118662 Gm15616-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000140659 Rpl5-005 retained_intron Mus_musculus 0 243
ENSMUST00000118025 Gm15766-001 processed_pseudogene Mus_musculus 3.00018e-42 176
ENSMUST00000121897 Gm15877-001 processed_pseudogene Mus_musculus 7e-24 115
ENSMUST00000151767 Rpl5-006 retained_intron Mus_musculus 7e-19 99

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