C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15616
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118662 Gm15616-001 ENSMUSG00000082705 10090 + 5:72047205-72047579 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonKidneyLiverLungOvaryPlacentaENSMUST00000118662
Transcript ID Adipose Bladder Brain Breast Colon Kidney Liver Lung Ovary Placenta
ENSMUST00000118662 0.497±0.27 0.101±0.00 1.926±2.10 0.647±0.38 0.567±0.00 0.186±0.00 0.882±0.80 0.250±0.00 0.490±0.49 0.217±0.15

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001N0 CIL_0001N0_0002 CGP 5:71569734-72138389
CIL_0005LI CIL_0005LI_0003 CGP 5:71699932-72168183

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000315741 RPL5-006 protein_coding Homo_sapiens 0 490
ENST00000370321 RPL5-001 protein_coding Homo_sapiens 0 490
ENST00000392009 RPL5P5-001 processed_pseudogene Homo_sapiens 0 366
ENST00000396820 RPL5P8-001 processed_pseudogene Homo_sapiens 0 348
ENST00000398869 RPL5P35-001 unprocessed_pseudogene Homo_sapiens 0 387
ENST00000425640 RPL5P6-001 processed_pseudogene Homo_sapiens 0 427
ENST00000426545 RPL5P34-001 processed_pseudogene Homo_sapiens 0 473
ENST00000437011 RPL5P27-001 processed_pseudogene Homo_sapiens 0 320
ENST00000441148 RPL5P25-001 processed_pseudogene Homo_sapiens 0 394
ENST00000448118 RPL5P9-001 processed_pseudogene Homo_sapiens 0 418
ENST00000454085 RPL5P32-001 processed_pseudogene Homo_sapiens 0 307
ENST00000460716 RPL5P1-001 processed_pseudogene Homo_sapiens 0 453
ENST00000461952 RPL5-004 retained_intron Homo_sapiens 0 414
ENST00000463742 RPL5P24-001 processed_pseudogene Homo_sapiens 0 377
ENST00000465511 RPL5P30-001 processed_pseudogene Homo_sapiens 0 431
ENST00000469685 RPL5P17-001 processed_pseudogene Homo_sapiens 0 363
ENST00000470843 RPL5-003 nonsense_mediated_decay Homo_sapiens 0 279
ENST00000477071 RPL5P12-001 processed_pseudogene Homo_sapiens 0 403
ENST00000482972 RPL5P29-001 processed_pseudogene Homo_sapiens 0 409
ENST00000496040 RPL5P23-001 processed_pseudogene Homo_sapiens 0 433
ENST00000498068 RPL5P11-001 processed_pseudogene Homo_sapiens 0 250

Loading