C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, alpha 3c
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000400113 TUBA3C-002 ENSG00000198033 9606 - 13:19173770-19181852 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalTestisENST00000400113
Transcript ID Adipose Adrenal Testis
ENST00000400113 0.237±0.00 0.142±0.00 229.681±76.88

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005634 IDA nucleus
GO:0005737 IEA cytoplasm
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0006457 TAS protein folding
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0044267 TAS cellular protein metabolic process
GO:0051084 TAS 'de novo' posttranslational protein folding
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000088246 Tuba3a-201 protein_coding Mus_musculus 0 1818
ENSMUST00000087445 Tuba3b-001 protein_coding Mus_musculus 0 1814
ENSMUST00000186213 Tuba4a-001 protein_coding Mus_musculus 0 1286
ENSMUST00000079464 Tuba4a-002 protein_coding Mus_musculus 0 1275
ENSDART00000009277 tuba1a-001 protein_coding Danio_rerio 0 1247
ENSDART00000077539 tuba1c-001 protein_coding Danio_rerio 0 1242
ENSDART00000123518 tuba1b-001 protein_coding Danio_rerio 0 1206
ENSDART00000102715 tuba8l3-001 protein_coding Danio_rerio 0 1059
ENSDART00000102713 protein_coding Danio_rerio 0 1033
ENSDART00000016360 protein_coding Danio_rerio 0 1027
ENSDART00000066177 tuba2-001 protein_coding Danio_rerio 0 979
ENSMUST00000188593 Tuba4a-003 protein_coding Mus_musculus 0 926
ENSDART00000115157 tuba4l-201 protein_coding Danio_rerio 0 815
ENSMUST00000186971 Tuba4a-008 protein_coding Mus_musculus 0 503
ENSDART00000113297 tuba1b-201 protein_coding Danio_rerio 0 305
ENSMUST00000117552 Gm21998-001 processed_pseudogene Mus_musculus 0 211
ENSMUST00000121141 Gm3928-001 processed_pseudogene Mus_musculus 0 211

Loading