C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, alpha 1b
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000113297 tuba1b-201 ENSDARG00000045367 7955 + 23:35765101-35768063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000113297
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000113297 3.665±1.88 41.871±0.00 3.129±1.86 0.213±0.00 1.913±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003924 IEA GTPase activity
GO:0005525 IEA GTP binding
GO:0006184 IEA GTP catabolic process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000029297 Slc7a11-001 protein_coding Mus_musculus 0 274
ENSMUST00000058914 Tuba1c-201 protein_coding Mus_musculus 0 351
ENSMUST00000077577 Tuba1b-001 protein_coding Mus_musculus 0 351
ENSMUST00000087445 Tuba3b-001 protein_coding Mus_musculus 0 252
ENSMUST00000088246 Tuba3a-201 protein_coding Mus_musculus 0 333
ENSMUST00000097014 Tuba1a-001 protein_coding Mus_musculus 0 348
ENSMUST00000122404 Gm14150-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000140969 Tuba1b-002 retained_intron Mus_musculus 0 254
ENSMUST00000169182 Gm3756-201 processed_pseudogene Mus_musculus 0 296
ENSMUST00000169666 Gm6682-201 processed_pseudogene Mus_musculus 0 296
ENST00000312988 TUBA3E-001 protein_coding Homo_sapiens 0 300
ENST00000321253 TUBA3D-001 protein_coding Homo_sapiens 0 305
ENST00000332858 TUBA1B-002 retained_intron Homo_sapiens 0 364
ENST00000336023 TUBA1B-001 protein_coding Homo_sapiens 0 368
ENST00000400113 TUBA3C-002 protein_coding Homo_sapiens 0 305
ENST00000547476 TUBA1B-007 protein_coding Homo_sapiens 0 364
ENST00000547765 TUBA1B-006 nonsense_mediated_decay Homo_sapiens 0 364
ENST00000549870 TUBA1B-011 protein_coding Homo_sapiens 0 364
ENST00000550367 TUBA1B-010 protein_coding Homo_sapiens 0 368
ENST00000551324 TUBA1B-008 retained_intron Homo_sapiens 0 255
ENST00000552984 TUBA1B-009 protein_coding Homo_sapiens 0 272
ENST00000618094 TUBA3C-201 protein_coding Homo_sapiens 0 305

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