C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, alpha 8 like 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000102715 tuba8l3-001 ENSDARG00000070155 7955 - 9:7704154-7715372 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000102715
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000102715 9.247±8.03 6.934±5.04 2.493±0.60 0.239±0.00 6.954±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0021782 IMP glial cell development
GO:0042552 IMP myelination
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032233 Tuba8-001 protein_coding Mus_musculus 0 968
ENSMUST00000058914 Tuba1c-201 protein_coding Mus_musculus 0 1221
ENSMUST00000077577 Tuba1b-001 protein_coding Mus_musculus 0 1212
ENSMUST00000078739 Gm17383-201 pseudogene Mus_musculus 0 904
ENSMUST00000079464 Tuba4a-002 protein_coding Mus_musculus 0 1094
ENSMUST00000097014 Tuba1a-001 protein_coding Mus_musculus 0 1190
ENSMUST00000122404 Gm14150-001 processed_pseudogene Mus_musculus 0 1166
ENSMUST00000134214 Tuba1a-002 processed_transcript Mus_musculus 0 484
ENSMUST00000136329 Tuba1a-003 processed_transcript Mus_musculus 0 771
ENSMUST00000186213 Tuba4a-001 protein_coding Mus_musculus 0 1099
ENSMUST00000187103 Tuba4a-005 retained_intron Mus_musculus 1e-30 137
ENSMUST00000188593 Tuba4a-003 protein_coding Mus_musculus 0 865
ENST00000248437 TUBA4A-001 protein_coding Homo_sapiens 0 1138
ENST00000392088 TUBA4A-002 protein_coding Homo_sapiens 0 1134
ENST00000398989 TUBA4A-011 protein_coding Homo_sapiens 0 542
ENST00000400113 TUBA3C-002 protein_coding Homo_sapiens 0 1059
ENST00000410028 TUBA3GP-001 unprocessed_pseudogene Homo_sapiens 0 645
ENST00000442868 RP11-480I12.5-004 transcribed_unprocessed_pseudogene Homo_sapiens 0 459
ENST00000472881 RP11-959F10.5-001 processed_pseudogene Homo_sapiens 0 595
ENST00000486997 TUBA4B-004 transcribed_unprocessed_pseudogene Homo_sapiens 0 942
ENST00000490341 TUBA4B-001 processed_transcript Homo_sapiens 0 839
ENST00000498660 TUBA4A-006 processed_transcript Homo_sapiens 0 680
ENST00000618094 TUBA3C-201 protein_coding Homo_sapiens 0.0000005 60

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