C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: tubulin, alpha 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000066177 tuba2-001 ENSDARG00000045014 7955 - 11:3317109-3324048 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000066177
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000066177 165.248±5.85 0.718±0.08 2.090±0.81 0.271±0.00 4.404±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003924 IEA GTPase activity
GO:0005200 IEA structural constituent of cytoskeleton
GO:0005525 IEA GTP binding
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0005874 IEA microtubule
GO:0006184 IEA GTP catabolic process
GO:0007017 IEA microtubule-based process
GO:0043234 IEA protein complex
GO:0051258 IEA protein polymerization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000058914 Tuba1c-201 protein_coding Mus_musculus 0 1240
ENSMUST00000077577 Tuba1b-001 protein_coding Mus_musculus 0 1279
ENSMUST00000077991 Gm5620-001 processed_pseudogene Mus_musculus 0 1212
ENSMUST00000078739 Gm17383-201 pseudogene Mus_musculus 0 948
ENSMUST00000088246 Tuba3a-201 protein_coding Mus_musculus 0 1081
ENSMUST00000097014 Tuba1a-001 protein_coding Mus_musculus 0 1280
ENSMUST00000122404 Gm14150-001 processed_pseudogene Mus_musculus 0 1232
ENSMUST00000134214 Tuba1a-002 processed_transcript Mus_musculus 0 501
ENSMUST00000136329 Tuba1a-003 processed_transcript Mus_musculus 0 771
ENSMUST00000140969 Tuba1b-002 retained_intron Mus_musculus 0 220
ENST00000295766 TUBA1A-002 protein_coding Homo_sapiens 0 1212
ENST00000301071 TUBA1A-001 protein_coding Homo_sapiens 0 1212
ENST00000301072 TUBA1C-001 protein_coding Homo_sapiens 0 1175
ENST00000312988 TUBA3E-001 protein_coding Homo_sapiens 0 983
ENST00000316027 TUBA8-002 protein_coding Homo_sapiens 0 811
ENST00000321253 TUBA3D-001 protein_coding Homo_sapiens 0 1000
ENST00000330423 TUBA8-001 protein_coding Homo_sapiens 0 813
ENST00000332858 TUBA1B-002 retained_intron Homo_sapiens 0 1203
ENST00000336023 TUBA1B-001 protein_coding Homo_sapiens 0 1206
ENST00000400113 TUBA3C-002 protein_coding Homo_sapiens 0 979
ENST00000416740 TUBA8-003 protein_coding Homo_sapiens 0 811
ENST00000425085 TUBAP-001 processed_pseudogene Homo_sapiens 0 444
ENST00000474897 PEX26-004 nonsense_mediated_decay Homo_sapiens 0 811
ENST00000530835 TUBAP2-001 processed_pseudogene Homo_sapiens 0 1070
ENST00000541364 TUBA1C-002 protein_coding Homo_sapiens 0 1171
ENST00000546918 TUBA1A-011 protein_coding Homo_sapiens 0 470
ENST00000547765 TUBA1B-006 nonsense_mediated_decay Homo_sapiens 0 1203
ENST00000547939 TUBA1A-009 protein_coding Homo_sapiens 0 688
ENST00000548470 TUBA1C-007 retained_intron Homo_sapiens 0 968
ENST00000550367 TUBA1B-010 protein_coding Homo_sapiens 0 322
ENST00000550767 TUBA1A-006 protein_coding Homo_sapiens 0 1208
ENST00000552448 TUBA1C-003 nonsense_mediated_decay Homo_sapiens 0 1171
ENST00000559595 RP11-522B15.6-001 processed_pseudogene Homo_sapiens 0 198
ENST00000618094 TUBA3C-201 protein_coding Homo_sapiens 0 850

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