C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000401075 RP11-439L8.2-001 ENSG00000215899 9606 - 1:31487589-31488930 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000401075
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000401075 0.176±0.00 0.141±0.00 0.063±0.00 0.172±0.00 0.224±0.00 0.009±0.00 0.219±0.00 0.026±0.00 0.055±0.00 0.069±0.00 0.067±0.00 0.164±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1057
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1014
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 929
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 881
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 874
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 584
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 556
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 492
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 446
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 433
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 412
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 392

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