C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chimerin 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409597 CHN1-014 ENSG00000128656 9606 - 2:174799515-174846405 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000409597
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000409597 1.694±0.00 7.088±0.00 141.957±0.00 0.823±0.00 0.950±0.00 1.185±0.00 0.452±0.00 0.114±0.00 4.605±0.00 0.414±0.00 1.728±0.00 4.440±0.00 10.577±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001HC CIL_0001HC_0001 CGP 2:174747592-175005369
CIL_0001HB CIL_0001HB_0001 CGP 2:174799363-175168382

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005622 IEA intracellular
GO:0007165 IEA signal transduction
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000180045 Chn1-202 protein_coding Mus_musculus 0 1410
ENSMUST00000102677 Chn1-002 protein_coding Mus_musculus 0 1410
ENSMUST00000112024 Chn1-001 protein_coding Mus_musculus 0 1410
ENSMUST00000166199 Chn1-201 protein_coding Mus_musculus 0 1046
ENSMUST00000070579 Chn1-003 protein_coding Mus_musculus 0 1005
ENSMUST00000154258 Chn1-007 protein_coding Mus_musculus 0 481
ENSMUST00000124450 Chn1-006 nonsense_mediated_decay Mus_musculus 0 462
ENSMUST00000136953 Chn1-008 protein_coding Mus_musculus 0 418
ENSMUST00000139252 Chn1-004 nonsense_mediated_decay Mus_musculus 0 366

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