C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: methyltransferase like 5
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000410097 METTL5-004 ENSG00000138382 9606 - 2:169811814-169824874 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; KidneyLiverMuscleENST00000410097
Transcript ID Kidney Liver Muscle
ENST00000410097 10.584±0.00 3.181±0.00 4.212±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004SC CIL_0004SC_0001 CGP 2:169694488-169812064
CIL_0007VY CIL_0007VY_0001 VISTA 2:169713097-170314655
CIL_0004SJ CIL_0004SJ_0001 CGP 2:169791933-169824931
CIL_0004SI CIL_0004SI_0001 CGP 2:169810081-170084131

Gene Ontology

GO IDEvidence TypeGO Description
GO:0001510 IEA RNA methylation
GO:0003676 IEA nucleic acid binding
GO:0005737 IEA cytoplasm
GO:0006479 IEA protein methylation
GO:0008152 IEA metabolic process
GO:0008168 IEA methyltransferase activity
GO:0008276 IEA protein methyltransferase activity
GO:0009452 IEA 7-methylguanosine RNA capping
GO:0031167 IEA rRNA methylation
GO:0032259 IEA methylation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060447 Mettl5-001 protein_coding Mus_musculus 0 819
ENSMUST00000135487 Mettl5-003 retained_intron Mus_musculus 0 693
ENSMUST00000142127 Mettl5-002 nonsense_mediated_decay Mus_musculus 0 568
ENSMUST00000166411 Ssb-201 protein_coding Mus_musculus 0 207
ENSMUST00000090852 Ssb-001 protein_coding Mus_musculus 0 207
ENSMUST00000132603 Ssb-005 protein_coding Mus_musculus 0 206
ENSMUST00000132186 Ssb-002 nonsense_mediated_decay Mus_musculus 0 206
ENSMUST00000021864 Ssr1-201 protein_coding Mus_musculus 0.00002 55

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