C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0004K8_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000091409-ENSG00000152256 CGP 9606 2:172427354-172608669
GeneTranscriptPositionBiotype
ENSG00000091409 (ITGA6)
integrin, alpha 6 		ENST00000264107 (ITGA6-001) 172427555-172506230 protein_coding
ENST00000409080 (ITGA6-004) 172427789-172506282 protein_coding
ENST00000409532 (ITGA6-003) 172427418-172504534 protein_coding
ENST00000412899 (ITGA6-002) 172427354-172474977 protein_coding
ENST00000416789 (ITGA6-006) 172487962-172504328 protein_coding
ENST00000442250 (ITGA6-010) 172427789-172504252 protein_coding
ENST00000458358 (ITGA6-011) 172427789-172504252 protein_coding
ENST00000469534 (ITGA6-007) 172488005-172489928 retained_intron
ENST00000470259 (ITGA6-008) 172490792-172491254 retained_intron
ENST00000475302 (ITGA6-009) 172490929-172501818 retained_intron
ENST00000497107 (ITGA6-005) 172468998-172474112 retained_intron
ENSG00000152256 (PDK1)
pyruvate dehydrogenase kinase, isozyme 1 		ENST00000282077 (PDK1-001) 172555969-172608669 protein_coding
ENST00000392571 (PDK1-003) 172556007-172595969 protein_coding
ENST00000410055 (PDK1-002) 172556051-172599137 protein_coding
ENST00000416991 (PDK1-008) 172556313-172570812 protein_coding
ENST00000431718 (PDK1-006) 172556102-172570820 nonsense_mediated_decay
ENST00000436490 (PDK1-005) 172555627-172564687 nonsense_mediated_decay
ENST00000439519 (PDK1-007) 172556565-172565073 protein_coding
ENST00000443353 (PDK1-004) 172555373-172565073 protein_coding
ENST00000466437 (PDK1-009) 172570585-172595962 retained_intron
CIL_0004K8_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000027111-ENSMUSG00000006494 CGP 10090 2:71745616-71903858
GeneTranscriptPositionBiotype
ENSMUSG00000006494 (Pdk1)
pyruvate dehydrogenase kinase, isoenzyme 1 		ENSMUST00000006669 (Pdk1-001) 71873224-71903858 protein_coding
ENSMUST00000129427 (Pdk1-008) 71887418-71896493 processed_transcript
ENSMUST00000129887 (Pdk1-005) 71875079-71883607 processed_transcript
ENSMUST00000134362 (Pdk1-007) 71873326-71886312 processed_transcript
ENSMUST00000148249 (Pdk1-006) 71873551-71884184 processed_transcript
ENSMUST00000151358 (Pdk1-003) 71873743-71888952 processed_transcript
ENSMUST00000152696 (Pdk1-004) 71873320-71883932 processed_transcript
ENSMUST00000156036 (Pdk1-002) 71873346-71901986 processed_transcript
ENSMUSG00000027111 (Itga6)
integrin alpha 6 		ENSMUST00000028522 (Itga6-001) 71786978-71856758 protein_coding
ENSMUST00000112101 (Itga6-002) 71786940-71856771 protein_coding
ENSMUST00000126787 (Itga6-005) 71849029-71858416 processed_transcript
ENSMUST00000133124 (Itga6-007) 71745616-71820254 processed_transcript
ENSMUST00000139760 (Itga6-009) 71849437-71852635 processed_transcript
ENSMUST00000152009 (Itga6-003) 71786929-71820943 processed_transcript
ENSMUST00000155249 (Itga6-004) 71826762-71854951 protein_coding
ENSMUST00000155596 (Itga6-008) 71838081-71838914 processed_transcript
ENSMUSG00000081878 (Gm13739)
predicted gene 13739 		ENSMUST00000118020 (Gm13739-001) 71762238-71762767 processed_pseudogene
ENSMUSG00000084794 (Gm13662)
predicted gene 13662 		ENSMUST00000157059 (Gm13662-001) 71749925-71759801 processed_transcript
ENSMUSG00000097235 (Gm17250)
predicted gene, 17250 		ENSMUST00000180494 (Gm17250-201) 71748075-71750162 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004K8_0001ENSG00000091409ENST00000264107ENST00000409080ENST00000409532ENST00000412899ENST00000416789ENST00000442250ENST00000458358ENST00000469534ENST00000470259ENST00000475302ENST00000497107ENSG00000152256ENST00000282077ENST00000392571ENST00000410055ENST00000416991ENST00000431718ENST00000436490ENST00000439519ENST00000443353ENST00000466437CIL_0004K8_0002ENSMUSG00000006494ENSMUST00000006669ENSMUST00000129427ENSMUST00000129887ENSMUST00000134362ENSMUST00000148249ENSMUST00000151358ENSMUST00000152696ENSMUST00000156036ENSMUSG00000027111ENSMUST00000028522ENSMUST00000112101ENSMUST00000126787ENSMUST00000133124ENSMUST00000139760ENSMUST00000152009ENSMUST00000155249ENSMUST00000155596ENSMUSG00000081878ENSMUST00000118020ENSMUSG00000084794ENSMUST00000157059ENSMUSG00000097235ENSMUST00000180494
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0004K8_0001ENSG00000091409ENST00000264107ENST00000409080ENST00000409532ENST00000416789ENST00000442250ENST00000458358ENST00000497107ENSG00000152256ENST00000282077ENST00000410055CIL_0004K8_0002ENSMUSG00000006494ENSMUST00000006669ENSMUST00000134362ENSMUST00000151358ENSMUST00000152696ENSMUST00000156036ENSMUSG00000027111ENSMUST00000028522ENSMUST00000112101ENSMUST00000126787ENSMUST00000139760ENSMUST00000152009ENSMUSG00000081878ENSMUST00000118020ENSMUSG00000084794ENSMUST00000157059ENSMUSG00000097235ENSMUST00000180494
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000091409 ENST00000264107 27.218±0.00 9.432±0.00 2.911±0.00 1.964±0.03 11.576±6.60 12.148±0.00 6.287±0.33 N/A 4.945±0.00 6.052±3.19 3.094±0.00 15.475±9.91 17.055±10.60 5.009±0.00
ENST00000409080 32.748±0.00 5.360±0.00 3.957±0.00 6.485±0.00 8.966±0.61 15.044±1.97 5.023±0.00 12.187±0.00 2.484±0.61 7.892±0.14 N/A 8.250±4.29 22.508±6.64 13.498±0.00
ENST00000409532 N/A N/A N/A N/A N/A N/A N/A 1.563±0.00 N/A N/A 3.302±0.00 12.666±0.00 N/A N/A
ENST00000412899 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416789 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.834±0.00
ENST00000442250 N/A N/A N/A N/A N/A N/A N/A 1.944±0.00 N/A 9.116±0.00 N/A N/A N/A N/A
ENST00000458358 N/A N/A N/A N/A 6.247±0.00 13.765±0.00 6.330±0.00 N/A 8.484±0.00 N/A N/A N/A N/A N/A
ENST00000469534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000470259 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475302 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000497107 N/A N/A 44.079±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000152256 ENST00000282077 N/A 1.448±0.00 N/A 0.660±0.02 1.766±0.00 N/A 1.714±0.00 N/A 0.672±0.44 1.975±0.00 N/A 2.122±1.58 N/A N/A
ENST00000392571 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410055 N/A N/A N/A 3.182±0.00 N/A N/A 6.729±0.00 N/A 1.344±0.00 N/A 1.796±0.00 3.261±1.46 N/A N/A
ENST00000416991 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436490 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000439519 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443353 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006494 ENSMUST00000006669 7.098±2.05 7.442±1.35 7.263±0.44 4.310±1.34 9.831±5.25 6.952±1.14 17.767±4.86 7.289±0.83 8.148±1.14 4.999±0.67 11.331±1.04 4.985±1.41 3.943±1.69 1.189±0.59
ENSMUST00000129427 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000129887 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000134362 N/A 20.774±3.12 N/A N/A 20.580±6.66 4.827±0.00 N/A N/A 11.486±0.50 5.013±1.15 N/A 5.829±1.22 N/A 1.565±0.00
ENSMUST00000148249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151358 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.483±1.40 N/A
ENSMUST00000152696 N/A 95.006±21.48 N/A N/A N/A 13.333±1.27 N/A N/A N/A N/A N/A 9.808±3.07 N/A N/A
ENSMUST00000156036 3.725±0.40 N/A 4.307±0.59 1.104±0.00 4.139±0.83 N/A N/A 1.918±0.23 9.194±2.19 2.297±0.27 N/A 4.574±1.16 5.875±1.98 1.553±0.53
ENSMUSG00000027111 ENSMUST00000028522 15.421±4.73 6.005±1.31 7.299±0.00 1.495±0.00 6.907±2.62 N/A 5.562±0.62 3.431±0.00 1.202±0.74 9.518±1.25 0.712±0.00 6.862±3.71 12.963±5.08 1.053±0.32
ENSMUST00000112101 5.939±0.00 9.778±2.20 N/A 2.435±1.38 3.957±0.12 6.967±0.39 2.942±0.36 11.527±2.85 0.521±0.18 6.664±1.86 1.362±0.00 2.224±0.00 4.514±1.20 0.539±0.01
ENSMUST00000126787 26.890±7.17 15.734±2.50 9.280±4.61 5.223±3.22 15.015±3.97 15.618±4.87 10.646±1.25 27.029±3.63 2.363±1.13 26.863±3.43 2.053±0.39 11.949±4.80 13.102±2.81 1.666±0.50
ENSMUST00000133124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139760 N/A 56.941±9.11 N/A N/A N/A N/A 86.979±43.81 N/A N/A N/A N/A 61.163±33.12 N/A 7.054±0.84
ENSMUST00000152009 N/A 28.780±11.04 N/A N/A 11.911±1.27 28.245±4.82 N/A N/A 0.633±0.00 13.310±0.00 N/A 20.098±2.85 N/A N/A
ENSMUST00000155249 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000155596 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000081878 ENSMUST00000118020 N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000084794 ENSMUST00000157059 N/A N/A N/A N/A N/A N/A N/A N/A 0.012±0.00 N/A N/A N/A N/A N/A
ENSMUSG00000097235 ENSMUST00000180494 0.176±0.00 N/A N/A 0.121±0.07 0.065±0.00 N/A N/A N/A N/A N/A 0.040±0.00 0.033±0.00 0.067±0.04 N/A

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