C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: nucleophosmin 1 (nucleolar phosphoprotein B23, numatrin) pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000423757 NPM1P12-001 ENSG00000215311 9606 + 7:149334024-149334857 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000423757
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000423757 0.013±0.00 0.053±0.00 0.013±0.00 0.038±0.00 0.072±0.00 0.012±0.00 0.052±0.00 0.024±0.00 0.046±0.00 0.060±0.05 0.024±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118871 Gm15484-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000164523 Gm5611-201 protein_coding Mus_musculus 0 804
ENSMUST00000172394 Gm17060-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000168993 Gm7289-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000118047 Gm14681-001 processed_pseudogene Mus_musculus 0 464
ENSMUST00000075641 Npm1-001 protein_coding Mus_musculus 0 464
ENSMUST00000109354 Npm1-002 protein_coding Mus_musculus 0 311
ENSMUST00000101375 Npm1-003 protein_coding Mus_musculus 0 309
ENSMUST00000093201 Npm1-006 protein_coding Mus_musculus 0 305
ENSMUST00000146759 Npm1-005 processed_transcript Mus_musculus 0 255
ENSMUST00000117205 Gm13423-001 processed_pseudogene Mus_musculus 0 231
ENSMUST00000121029 Gm14776-001 processed_pseudogene Mus_musculus 0 226
ENSMUST00000141881 Npm1-004 processed_transcript Mus_musculus 4e-36 156

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