C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430498 RP11-104D3.2-001 ENSG00000236468 9606 + 1:199387141-199388475 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000430498
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000430498 0.130±0.00 0.096±0.00 0.029±0.00 0.123±0.00 0.124±0.00 0.084±0.00 0.025±0.00 0.076±0.00 0.032±0.00 0.023±0.00 0.112±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 1210
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 1168
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 1142
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 1062
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 1038
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 989
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 579
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 560
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 499
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 466
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 390
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 361

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