C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000430685 RP11-214N15.5-001 ENSG00000234017 9606 - 10:112548632-112548872 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000430685
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000430685 4.348±0.00 4.545±0.00 1.703±0.00 2.846±0.00 3.950±0.00 0.417±0.00 2.610±0.00 1.636±0.93 2.288±0.00 1.080±0.00 5.476±5.22 2.737±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093P CIL_00093P_0001 VISTA 10:112343926-112944807
CIL_0006OV CIL_0006OV_0001 CGP 10:112430300-112818744
CIL_0006OU CIL_0006OU_0001 CGP 10:112446998-113167678
CIL_0007PE CIL_0007PE_0001 UCNEbase 10:112490627-113337047

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 283
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 281
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 281
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 265
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 259
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 235
ENSMUST00000187291 RP23-465C10.2-001 processed_pseudogene Mus_musculus 6e-39 163

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