C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: actin, beta pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000435871 ACTBP12-001 ENSG00000233125 9606 - 1:92229018-92229435 transcribed_processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005ZU CIL_0005ZU_0001 CGP 1:92167052-92245813
CIL_0007CA CIL_0007CA_0002 CGP 1:92217940-92298987

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000082300 Gm8399-201 pseudogene Mus_musculus 0 460
ENSMUST00000106215 Actg1-201 protein_coding Mus_musculus 0 449
ENSMUST00000071555 Actg1-001 protein_coding Mus_musculus 0 449
ENSMUST00000121430 Gm12715-001 processed_pseudogene Mus_musculus 0 438
ENSMUST00000167721 Actb-002 protein_coding Mus_musculus 0 412
ENSMUST00000100497 Actb-001 protein_coding Mus_musculus 0 412
ENSMUST00000131103 Actg1-002 nonsense_mediated_decay Mus_musculus 0 407
ENSMUST00000119947 Gm15725-001 transcribed_processed_pseudogene Mus_musculus 0 379
ENSMUST00000078717 Lrrc58-001 protein_coding Mus_musculus 0 379
ENSMUST00000118518 Gm12003-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000062147 Actg1-006 protein_coding Mus_musculus 0 339
ENSMUST00000146697 Gm8464-001 transcribed_processed_pseudogene Mus_musculus 7e-36 154
ENSMUST00000140208 Gm8464-002 processed_transcript Mus_musculus 7e-36 154
ENSMUST00000151942 Gm4750-001 transcribed_processed_pseudogene Mus_musculus 7e-36 154
ENSMUST00000152262 Gm4750-002 processed_transcript Mus_musculus 7e-36 154

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