C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 4750
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000152262 Gm4750-002 ENSMUSG00000087235 10090 + X:152432477-152434676 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainPlacentaENSMUST00000152262
Transcript ID Brain Placenta
ENSMUST00000152262 0.052±0.01 0.002±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSDART00000141737 actb2-001 protein_coding Danio_rerio 0 876
ENSDART00000055194 actb2-007 protein_coding Danio_rerio 0 876
ENSDART00000054987 actb1-001 protein_coding Danio_rerio 0 828
ENSDART00000133319 actb1-005 protein_coding Danio_rerio 0 743
ENSDART00000080664 protein_coding Danio_rerio 0 654
ENSDART00000058629 acta1b-001 protein_coding Danio_rerio 0 649
ENSDART00000062370 actc1a-001 protein_coding Danio_rerio 0 638
ENSDART00000114549 hm:zewp0073-201 protein_coding Danio_rerio 0 610
ENSDART00000134020 actb2-003 processed_transcript Danio_rerio 0 579
ENSDART00000138324 actb1-004 protein_coding Danio_rerio 0 547
ENSDART00000148290 actb2-002 nonsense_mediated_decay Danio_rerio 0 545
ENSDART00000132497 actb2-006 retained_intron Danio_rerio 0 542
ENSDART00000066430 acta2-201 protein_coding Danio_rerio 0 531
ENSDART00000149990 acta2-001 protein_coding Danio_rerio 0 523
ENSDART00000148067 actb1-003 processed_transcript Danio_rerio 0 520
ENSDART00000109883 ACTC1 (2 of 2)-002 protein_coding Danio_rerio 0 507
ENSDART00000141407 actb1-002 protein_coding Danio_rerio 0 418
ENSDART00000135971 actb2-005 retained_intron Danio_rerio 0 231
ENSDART00000055136 actc1b-201 protein_coding Danio_rerio 3e-36 158
ENSDART00000155770 ACTC1 (2 of 2)-001 protein_coding Danio_rerio 8e-27 126
ENST00000224784 ACTA2-001 protein_coding Homo_sapiens 0 595
ENST00000290378 ACTC1-001 protein_coding Homo_sapiens 0 771
ENST00000331789 ACTB-001 protein_coding Homo_sapiens 0 1262
ENST00000331925 ACTG1-001 protein_coding Homo_sapiens 0 924
ENST00000345517 ACTG2-001 protein_coding Homo_sapiens 0 671
ENST00000356920 POTEE-001 protein_coding Homo_sapiens 0 918
ENST00000357462 POTEF-201 protein_coding Homo_sapiens 0 913
ENST00000366683 ACTA1-201 protein_coding Homo_sapiens 9e-34 148
ENST00000366684 ACTA1-001 protein_coding Homo_sapiens 0 621
ENST00000397487 POTEKP-001 unprocessed_pseudogene Homo_sapiens 0 848
ENST00000403258 ACTBP8-001 processed_pseudogene Homo_sapiens 0 765
ENST00000409602 POTEJ-001 protein_coding Homo_sapiens 0 891
ENST00000409624 ACTG2-002 protein_coding Homo_sapiens 0 671
ENST00000409731 ACTG2-008 protein_coding Homo_sapiens 0 560
ENST00000409914 POTEF-001 protein_coding Homo_sapiens 0 913
ENST00000414620 ACTB-010 protein_coding Homo_sapiens 1.99965e-42 176
ENST00000415794 ACTG1P1-001 processed_pseudogene Homo_sapiens 0 521
ENST00000417101 ACTB-012 protein_coding Homo_sapiens 0 241
ENST00000417657 LA16c-3G11.7-001 processed_pseudogene Homo_sapiens 0 878
ENST00000418987 RP11-394D2.1-001 processed_pseudogene Homo_sapiens 0 643
ENST00000420887 RP11-259P15.3-001 processed_pseudogene Homo_sapiens 0 427
ENST00000423293 RP11-12M9.4-001 processed_pseudogene Homo_sapiens 0 394
ENST00000423783 POTENP-001 processed_pseudogene Homo_sapiens 0 455
ENST00000425660 ACTB-002 nonsense_mediated_decay Homo_sapiens 0 915
ENST00000428275 ACTG1P10-001 processed_pseudogene Homo_sapiens 0 616
ENST00000431536 RP4-706L14.2-001 processed_pseudogene Homo_sapiens 0 627
ENST00000432588 ACTB-008 protein_coding Homo_sapiens 0 520
ENST00000435871 ACTBP12-001 transcribed_processed_pseudogene Homo_sapiens 7e-36 154
ENST00000436287 ACTBP11-001 processed_pseudogene Homo_sapiens 0 819
ENST00000437653 RP11-809F4.2-001 processed_pseudogene Homo_sapiens 0 545
ENST00000438902 ACTG2-005 nonsense_mediated_decay Homo_sapiens 0 560
ENST00000441772 AC139143.2-001 processed_pseudogene Homo_sapiens 6e-31 139
ENST00000443528 ACTB-009 protein_coding Homo_sapiens 0 265
ENST00000446382 ACTG1P14-001 processed_pseudogene Homo_sapiens 0 809
ENST00000451531 POTEI-001 protein_coding Homo_sapiens 0 907
ENST00000457622 ACTG1P9-001 processed_pseudogene Homo_sapiens 0 732
ENST00000458208 ACTA2-201 protein_coding Homo_sapiens 0 595
ENST00000462494 ACTB-003 retained_intron Homo_sapiens 0 915
ENST00000464611 ACTB-013 processed_transcript Homo_sapiens 0 206
ENST00000473257 ACTB-011 processed_transcript Homo_sapiens 0 544
ENST00000477812 ACTB-007 retained_intron Homo_sapiens 0 604
ENST00000480301 ACTB-006 retained_intron Homo_sapiens 0 294
ENST00000484841 ACTB-005 retained_intron Homo_sapiens 0 918
ENST00000486001 RP11-4K3__A.5-001 processed_pseudogene Homo_sapiens 0 246
ENST00000493945 ACTB-004 retained_intron Homo_sapiens 0 839
ENST00000502306 CTD-2313D3.1-001 processed_pseudogene Homo_sapiens 0 507
ENST00000507366 CTC-512J14.7-001 processed_pseudogene Homo_sapiens 0 680
ENST00000512165 CH17-12M21.1-001 processed_pseudogene Homo_sapiens 2e-20 104
ENST00000515712 ACTBP2-001 processed_pseudogene Homo_sapiens 0 883
ENST00000547848 POTEM-001 protein_coding Homo_sapiens 0 377
ENST00000558391 RP11-752G15.9-001 transcribed_processed_pseudogene Homo_sapiens 0 453
ENST00000560958 RP11-752G15.9-002 processed_transcript Homo_sapiens 0 453
ENST00000567299 CTC-543D15.1-001 processed_pseudogene Homo_sapiens 0 198
ENST00000570019 RP11-602M11.3-001 processed_pseudogene Homo_sapiens 0 547
ENST00000572105 ACTG1-015 nonsense_mediated_decay Homo_sapiens 0 584
ENST00000573283 ACTG1-003 protein_coding Homo_sapiens 0 924
ENST00000574671 ACTG1-008 retained_intron Homo_sapiens 0 636
ENST00000575087 ACTG1-002 protein_coding Homo_sapiens 0 924
ENST00000575842 ACTG1-012 protein_coding Homo_sapiens 0 924
ENST00000576209 ACTG1-009 retained_intron Homo_sapiens 0 905
ENST00000576544 ACTG1-006 nonsense_mediated_decay Homo_sapiens 0 924
ENST00000576917 ACTG1-004 retained_intron Homo_sapiens 1.4013e-45 189
ENST00000587663 ACTBP9-001 processed_pseudogene Homo_sapiens 0 802
ENST00000594933 ACTBP12-002 processed_transcript Homo_sapiens 9e-38 161
ENST00000615544 ACTG1-201 protein_coding Homo_sapiens 0 924

Loading