C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437011 RPL5P27-001 ENSG00000228195 9606 + 10:116749905-116751261 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastKidneyLungOvaryTestisENST00000437011
Transcript ID Adipose Adrenal Brain Breast Kidney Lung Ovary Testis
ENST00000437011 0.040±0.00 0.041±0.00 0.038±0.00 0.013±0.00 0.013±0.00 0.025±0.00 0.051±0.00 0.028±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004GX CIL_0004GX_0002 CGP 10:116671192-116911788

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 741
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 741
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 741
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 680
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 571
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 488
ENSMUST00000169624 Gm19840-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000118662 Gm15616-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000129944 Rpl5-004 retained_intron Mus_musculus 0 231

Loading